Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | ACL6ER_RS17985 | Genome accession | NZ_CP178717 |
| Coordinates | 3581841..3582182 (-) | Length | 113 a.a. |
| NCBI ID | WP_003235640.1 | Uniprot ID | A0A9Q4EUF4 |
| Organism | Bacillus inaquosorum strain SY1167 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3576841..3587182
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACL6ER_RS17970 (ACL6ER_17970) | - | 3577088..3579856 (+) | 2769 | WP_268331785.1 | DEAD/DEAH box helicase | - |
| ACL6ER_RS17975 (ACL6ER_17975) | - | 3579984..3580841 (-) | 858 | WP_268331783.1 | Cof-type HAD-IIB family hydrolase | - |
| ACL6ER_RS17980 (ACL6ER_17980) | glcR | 3580847..3581623 (-) | 777 | WP_268274198.1 | transcriptional regulator GlcR | - |
| ACL6ER_RS17985 (ACL6ER_17985) | ssbB | 3581841..3582182 (-) | 342 | WP_003235640.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| ACL6ER_RS17990 (ACL6ER_17990) | - | 3582259..3582642 (-) | 384 | WP_268331781.1 | hypothetical protein | - |
| ACL6ER_RS17995 (ACL6ER_17995) | - | 3582818..3583228 (+) | 411 | WP_032731815.1 | YwpF-like family protein | - |
| ACL6ER_RS18000 (ACL6ER_18000) | blaOXA | 3583250..3584047 (+) | 798 | WP_268285710.1 | class D beta-lactamase | - |
| ACL6ER_RS18005 (ACL6ER_18005) | - | 3584120..3584776 (-) | 657 | WP_268276310.1 | class A sortase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12506.16 Da Isoelectric Point: 7.8150
>NTDB_id=1090876 ACL6ER_RS17985 WP_003235640.1 3581841..3582182(-) (ssbB) [Bacillus inaquosorum strain SY1167]
MFNQVMLVGRLTKDPELRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKTAD
MFNQVMLVGRLTKDPELRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKTAD
Nucleotide
Download Length: 342 bp
>NTDB_id=1090876 ACL6ER_RS17985 WP_003235640.1 3581841..3582182(-) (ssbB) [Bacillus inaquosorum strain SY1167]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGAGCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACACGTTACGCTCGCGGTAAACCGCAGCTTCAAAAATGCTTCAGGTGAAATCGAGGCCGATTACGTCAATTGCACGCTTT
GGAGAAAAACTGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGGCGGATCCAGACAAGG
AGCTATGAAAATGCAGAAGGCGTTAACGTGTATGTAACGGAAGTGTTGGCTGATACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAACGGCCGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGAGCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACACGTTACGCTCGCGGTAAACCGCAGCTTCAAAAATGCTTCAGGTGAAATCGAGGCCGATTACGTCAATTGCACGCTTT
GGAGAAAAACTGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGGCGGATCCAGACAAGG
AGCTATGAAAATGCAGAAGGCGTTAACGTGTATGTAACGGAAGTGTTGGCTGATACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAACGGCCGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
97.345 |
100 |
0.973 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.094 |
93.805 |
0.611 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.491 |
93.805 |
0.549 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
46.296 |
95.575 |
0.442 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
45.37 |
95.575 |
0.434 |
| ssbA | Streptococcus mutans UA159 |
45.283 |
93.805 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis SK321 |
44.444 |
95.575 |
0.425 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
42.857 |
92.92 |
0.398 |