Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | AACH49_RS06530 | Genome accession | NZ_AP028991 |
| Coordinates | 1314037..1314348 (+) | Length | 103 a.a. |
| NCBI ID | WP_101262880.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM19381 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1309037..1319348
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AACH49_RS06500 (TUM19381_12020) | - | 1309820..1310023 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| AACH49_RS06505 (TUM19381_12030) | - | 1310020..1311006 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| AACH49_RS06510 (TUM19381_12040) | - | 1311006..1311335 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AACH49_RS06515 (TUM19381_12050) | - | 1311332..1311955 (+) | 624 | WP_001223006.1 | MBL fold metallo-hydrolase | - |
| AACH49_RS06520 (TUM19381_12060) | comGA | 1312007..1312981 (+) | 975 | WP_000697215.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AACH49_RS06525 (TUM19381_12070) | comGB | 1312953..1314023 (+) | 1071 | WP_000776403.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AACH49_RS06530 (TUM19381_12080) | comGC | 1314037..1314348 (+) | 312 | WP_101262880.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AACH49_RS06535 (TUM19381_12090) | comGD | 1314326..1314772 (+) | 447 | WP_075583651.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AACH49_RS06540 (TUM19381_12100) | comGE | 1314759..1315058 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AACH49_RS06545 (TUM19381_12110) | comGF | 1314976..1315473 (+) | 498 | WP_029697681.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AACH49_RS06550 | - | 1315570..1315716 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| AACH49_RS06555 (TUM19381_12120) | - | 1315706..1316230 (+) | 525 | WP_001015122.1 | shikimate kinase | - |
| AACH49_RS06560 (TUM19381_12130) | gcvT | 1316389..1317480 (+) | 1092 | WP_000093355.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AACH49_RS06565 (TUM19381_12140) | gcvPA | 1317500..1318846 (+) | 1347 | WP_000019688.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11373.39 Da Isoelectric Point: 7.8600
>NTDB_id=107810 AACH49_RS06530 WP_101262880.1 1314037..1314348(+) (comGC) [Staphylococcus aureus strain TUM19381]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADDFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADDFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=107810 AACH49_RS06530 WP_101262880.1 1314037..1314348(+) (comGC) [Staphylococcus aureus strain TUM19381]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGATTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGATTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus mitis SK321 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae R6 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
50 |
83.495 |
0.417 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
41.837 |
95.146 |
0.398 |
| comYC | Streptococcus suis isolate S10 |
48.718 |
75.728 |
0.369 |