Detailed information NTG0107813

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: AACH49_RS06545
• Genome accession: NZ_AP028991
• Coordinates: 1314976..1315473 (+)
• Length: 165 a.a.
• NCBI ID: WP_029697681.1
• Uniprot ID: A0AAE2ZZ83
• Organism: Staphylococcus aureus strain TUM19381
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1309976..1320473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH49_RS06505 (TUM19381_12030)	-	1310020..1311006 (+)	987	WP_000161315.1	ROK family glucokinase	-
AACH49_RS06510 (TUM19381_12040)	-	1311006..1311335 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
AACH49_RS06515 (TUM19381_12050)	-	1311332..1311955 (+)	624	WP_001223006.1	MBL fold metallo-hydrolase	-
AACH49_RS06520 (TUM19381_12060)	comGA	1312007..1312981 (+)	975	WP_000697215.1	competence type IV pilus ATPase ComGA	Machinery gene
AACH49_RS06525 (TUM19381_12070)	comGB	1312953..1314023 (+)	1071	WP_000776403.1	competence type IV pilus assembly protein ComGB	Machinery gene
AACH49_RS06530 (TUM19381_12080)	comGC	1314037..1314348 (+)	312	WP_101262880.1	competence type IV pilus major pilin ComGC	Machinery gene
AACH49_RS06535 (TUM19381_12090)	comGD	1314326..1314772 (+)	447	WP_075583651.1	competence type IV pilus minor pilin ComGD	Machinery gene
AACH49_RS06540 (TUM19381_12100)	comGE	1314759..1315058 (+)	300	WP_000844413.1	hypothetical protein	Machinery gene
AACH49_RS06545 (TUM19381_12110)	comGF	1314976..1315473 (+)	498	WP_029697681.1	competence type IV pilus minor pilin ComGF	Machinery gene
AACH49_RS06550	-	1315570..1315716 (+)	147	WP_001789879.1	hypothetical protein	-
AACH49_RS06555 (TUM19381_12120)	-	1315706..1316230 (+)	525	WP_001015122.1	shikimate kinase	-
AACH49_RS06560 (TUM19381_12130)	gcvT	1316389..1317480 (+)	1092	WP_000093355.1	glycine cleavage system aminomethyltransferase GcvT	-
AACH49_RS06565 (TUM19381_12140)	gcvPA	1317500..1318846 (+)	1347	WP_000019688.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
AACH49_RS06570 (TUM19381_12150)	gcvPB	1318839..1320311 (+)	1473	WP_000202191.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19211.94 Da
• Isoelectric Point: 10.2436

>NTDB_id=107813 AACH49_RS06545 WP_029697681.1 1314976..1315473(+) (comGF) [Staphylococcus aureus strain TUM19381]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFRGVDRNDIEIRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=107813 AACH49_RS06545 WP_029697681.1 1314976..1315473(+) (comGF) [Staphylococcus aureus strain TUM19381]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTTATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAGAGGTGTAGATAGAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCTATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (69-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus N315	97.576	100	0.976
comGF	Staphylococcus aureus MW2	97.576	100	0.976