Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACI3L7_RS08395 | Genome accession | NZ_CP173387 |
| Coordinates | 1792388..1792675 (+) | Length | 95 a.a. |
| NCBI ID | WP_404969497.1 | Uniprot ID | - |
| Organism | Vibrio campbellii strain LB135 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1787388..1797675
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L7_RS08385 (ACI3L7_08385) | - | 1789896..1790168 (+) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
| ACI3L7_RS08390 (ACI3L7_08390) | ppiD | 1790383..1792242 (+) | 1860 | WP_050905548.1 | peptidylprolyl isomerase | - |
| ACI3L7_RS08395 (ACI3L7_08395) | comEA | 1792388..1792675 (+) | 288 | WP_404969497.1 | ComEA family DNA-binding protein | Machinery gene |
| ACI3L7_RS08400 (ACI3L7_08400) | rrtA | 1792821..1793372 (-) | 552 | WP_005425567.1 | rhombosortase | - |
| ACI3L7_RS08405 (ACI3L7_08405) | - | 1793376..1793993 (+) | 618 | WP_404969498.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| ACI3L7_RS08410 (ACI3L7_08410) | - | 1794014..1795348 (-) | 1335 | WP_404970490.1 | anti-phage deoxyguanosine triphosphatase | - |
| ACI3L7_RS08415 (ACI3L7_08415) | yfbR | 1795352..1795936 (-) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| ACI3L7_RS08420 (ACI3L7_08420) | - | 1796020..1797234 (-) | 1215 | WP_029788618.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10562.26 Da Isoelectric Point: 5.8692
>NTDB_id=1071931 ACI3L7_RS08395 WP_404969497.1 1792388..1792675(+) (comEA) [Vibrio campbellii strain LB135]
MKWMLTLCLLILAPMSWAETKTKADRYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
MKWMLTLCLLILAPMSWAETKTKADRYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
Nucleotide
Download Length: 288 bp
>NTDB_id=1071931 ACI3L7_RS08395 WP_404969497.1 1792388..1792675(+) (comEA) [Vibrio campbellii strain LB135]
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAGGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACAAAGGTGAAAGGC
ATCGGTGAGGCGACTGTTAAGAAGAACGAAGACCGCATCTTGCTGTAA
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAGGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACAAAGGTGAAAGGC
ATCGGTGAGGCGACTGTTAAGAAGAACGAAGACCGCATCTTGCTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
95.789 |
100 |
0.958 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
78.947 |
100 |
0.789 |
| comEA | Vibrio cholerae C6706 |
58.333 |
100 |
0.589 |
| comEA | Vibrio cholerae strain A1552 |
58.333 |
100 |
0.589 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.463 |
| comEA | Acinetobacter baumannii strain A118 |
31.707 |
100 |
0.411 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comEA | Acinetobacter baylyi ADP1 |
48.649 |
77.895 |
0.379 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.263 |
0.368 |