Detailed information NTG0106467

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AABA19_RS09835
• Genome accession: NZ_AP028609
• Coordinates: 1909531..1909935 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1904531..1914935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA19_RS09795 (TKY121806_19100)	rnpA	1904945..1905316 (-)	372	WP_000739246.1	ribonuclease P protein component	-
AABA19_RS09800	-	1905333..1905464 (-)	132	WP_000768904.1	hypothetical protein	-
AABA19_RS09805 (TKY121806_19110)	-	1905465..1906655 (-)	1191	WP_000167766.1	acetate kinase	-
AABA19_RS09810 (TKY121806_19120)	comYH	1906706..1907659 (-)	954	WP_338170756.1	class I SAM-dependent methyltransferase	Machinery gene
AABA19_RS09815	-	1907720..1908314 (-)	595	Protein_1910	class I SAM-dependent methyltransferase	-
AABA19_RS09820 (TKY121806_19150)	comGG/cglG	1908451..1908864 (-)	414	WP_050114148.1	competence type IV pilus minor pilin ComGG	Machinery gene
AABA19_RS09825 (TKY121806_19160)	comGF/cglF	1908842..1909303 (-)	462	WP_063643062.1	competence type IV pilus minor pilin ComGF	Machinery gene
AABA19_RS09830 (TKY121806_19170)	comGE/cglE	1909266..1909568 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AABA19_RS09835 (TKY121806_19180)	comGD/cglD	1909531..1909935 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
AABA19_RS09840 (TKY121806_19190)	comGC/cglC	1909928..1910254 (-)	327	WP_061630249.1	comG operon protein ComGC	Machinery gene
AABA19_RS09845 (TKY121806_19200)	comGB/cglB	1910256..1911272 (-)	1017	WP_075270915.1	competence type IV pilus assembly protein ComGB	Machinery gene
AABA19_RS09850 (TKY121806_19210)	comGA/cglA/cilD	1911220..1912161 (-)	942	WP_016398028.1	competence type IV pilus ATPase ComGA	Machinery gene
AABA19_RS09855 (TKY121806_19220)	-	1912237..1912602 (-)	366	WP_000286415.1	DUF1033 family protein	-
AABA19_RS09860 (TKY121806_19230)	-	1912753..1913811 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=106467 AABA19_RS09835 WP_000588023.1 1909531..1909935(-) (comGD/cglD) [Streptococcus pneumoniae strain Sep4]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=106467 AABA19_RS09835 WP_000588023.1 1909531..1909935(-) (comGD/cglD) [Streptococcus pneumoniae strain Sep4]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCGGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47