Detailed information NTG1056812

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ACFIOQ_RS06345
• Genome accession: NZ_CP170404
• Coordinates: 1221797..1222108 (+)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t7960
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1216797..1227108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOQ_RS06315	-	1217580..1217783 (+)	204	WP_000087561.1	YqgQ family protein	-
ACFIOQ_RS06320	-	1217780..1218766 (+)	987	WP_000161315.1	ROK family glucokinase	-
ACFIOQ_RS06325	-	1218766..1219095 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACFIOQ_RS06330	-	1219092..1219715 (+)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACFIOQ_RS06335	comGA	1219767..1220741 (+)	975	WP_111063875.1	competence type IV pilus ATPase ComGA	Machinery gene
ACFIOQ_RS06340	comGB	1220713..1221783 (+)	1071	WP_000776413.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACFIOQ_RS06345	comGC	1221797..1222108 (+)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACFIOQ_RS06350	comGD	1222086..1222532 (+)	447	WP_072357807.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACFIOQ_RS06355	comGE	1222519..1222818 (+)	300	WP_000844415.1	hypothetical protein	Machinery gene
ACFIOQ_RS06360	comGF	1222736..1223233 (+)	498	WP_001825340.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACFIOQ_RS06365	-	1223330..1223476 (+)	147	WP_001789879.1	hypothetical protein	-
ACFIOQ_RS06370	-	1223466..1223990 (+)	525	WP_001015120.1	shikimate kinase	-
ACFIOQ_RS06375	gcvT	1224149..1225240 (+)	1092	WP_000093354.1	glycine cleavage system aminomethyltransferase GcvT	-
ACFIOQ_RS06380	gcvPA	1225260..1226606 (+)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=1056812 ACFIOQ_RS06345 WP_000472256.1 1221797..1222108(+) (comGC) [Staphylococcus aureus strain t7960]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=1056812 ACFIOQ_RS06345 WP_000472256.1 1221797..1222108(+) (comGC) [Staphylococcus aureus strain t7960]
ATGTTTAAATTTCTAAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369