Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACFIOQ_RS06335 | Genome accession | NZ_CP170404 |
| Coordinates | 1219767..1220741 (+) | Length | 324 a.a. |
| NCBI ID | WP_111063875.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain t7960 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1214767..1225741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOQ_RS06300 | rpmG | 1215227..1215376 (+) | 150 | WP_001265709.1 | 50S ribosomal protein L33 | - |
| ACFIOQ_RS06305 | - | 1215585..1216124 (+) | 540 | WP_000164552.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACFIOQ_RS06310 | - | 1216136..1217599 (+) | 1464 | WP_001017867.1 | rhomboid family protein | - |
| ACFIOQ_RS06315 | - | 1217580..1217783 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ACFIOQ_RS06320 | - | 1217780..1218766 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| ACFIOQ_RS06325 | - | 1218766..1219095 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACFIOQ_RS06330 | - | 1219092..1219715 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACFIOQ_RS06335 | comGA | 1219767..1220741 (+) | 975 | WP_111063875.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACFIOQ_RS06340 | comGB | 1220713..1221783 (+) | 1071 | WP_000776413.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACFIOQ_RS06345 | comGC | 1221797..1222108 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFIOQ_RS06350 | comGD | 1222086..1222532 (+) | 447 | WP_072357807.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACFIOQ_RS06355 | comGE | 1222519..1222818 (+) | 300 | WP_000844415.1 | hypothetical protein | Machinery gene |
| ACFIOQ_RS06360 | comGF | 1222736..1223233 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACFIOQ_RS06365 | - | 1223330..1223476 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACFIOQ_RS06370 | - | 1223466..1223990 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| ACFIOQ_RS06375 | gcvT | 1224149..1225240 (+) | 1092 | WP_000093354.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36787.84 Da Isoelectric Point: 8.6515
>NTDB_id=1056810 ACFIOQ_RS06335 WP_111063875.1 1219767..1220741(+) (comGA) [Staphylococcus aureus strain t7960]
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIGDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSNNHSLPSSFKNLEDKLDDMIKAGVICETTM
DKYI
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIGDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSNNHSLPSSFKNLEDKLDDMIKAGVICETTM
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=1056810 ACFIOQ_RS06335 WP_111063875.1 1219767..1220741(+) (comGA) [Staphylococcus aureus strain t7960]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAATTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTAATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGACCTACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAAGATCCTGTAGAGATGCAAATTCCTGGTATTGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCGGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCAATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGATAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAATTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTAATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGACCTACTGGTTCAGGAAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAAGATCCTGTAGAGATGCAAATTCCTGGTATTGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCGGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCAATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGATAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
99.074 |
100 |
0.991 |
| comGA | Staphylococcus aureus N315 |
99.074 |
100 |
0.991 |