Detailed information NTG1056602

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ACFIOJ_RS06200
• Genome accession: NZ_CP170391
• Coordinates: 1207136..1207447 (+)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t21642
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1202136..1212447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOJ_RS06170	-	1202919..1203122 (+)	204	WP_000087561.1	YqgQ family protein	-
ACFIOJ_RS06175	-	1203119..1204105 (+)	987	WP_000161315.1	ROK family glucokinase	-
ACFIOJ_RS06180	-	1204105..1204434 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACFIOJ_RS06185	-	1204431..1205054 (+)	624	WP_054190028.1	MBL fold metallo-hydrolase	-
ACFIOJ_RS06190	comGA	1205106..1206080 (+)	975	WP_054191886.1	competence type IV pilus ATPase ComGA	Machinery gene
ACFIOJ_RS06195	comGB	1206052..1207122 (+)	1071	WP_410533933.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACFIOJ_RS06200	comGC	1207136..1207447 (+)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACFIOJ_RS06205	comGD	1207425..1207871 (+)	447	WP_077446655.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACFIOJ_RS06210	comGE	1207858..1208157 (+)	300	WP_410533935.1	competence protein ComGE	Machinery gene
ACFIOJ_RS06215	comGF	1208075..1208572 (+)	498	WP_410533936.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACFIOJ_RS06220	-	1208669..1208815 (+)	147	WP_410533937.1	hypothetical protein	-
ACFIOJ_RS06225	-	1208805..1209329 (+)	525	WP_054190023.1	shikimate kinase	-
ACFIOJ_RS06230	gcvT	1209488..1210579 (+)	1092	WP_410533939.1	glycine cleavage system aminomethyltransferase GcvT	-
ACFIOJ_RS06235	gcvPA	1210599..1211945 (+)	1347	WP_410533941.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=1056602 ACFIOJ_RS06200 WP_000472256.1 1207136..1207447(+) (comGC) [Staphylococcus aureus strain t21642]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=1056602 ACFIOJ_RS06200 WP_000472256.1 1207136..1207447(+) (comGC) [Staphylococcus aureus strain t21642]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTCATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369