Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACFIOJ_RS06190 | Genome accession | NZ_CP170391 |
| Coordinates | 1205106..1206080 (+) | Length | 324 a.a. |
| NCBI ID | WP_054191886.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain t21642 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1200106..1211080
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOJ_RS06155 | rpmG | 1200566..1200715 (+) | 150 | WP_001265709.1 | 50S ribosomal protein L33 | - |
| ACFIOJ_RS06160 | - | 1200924..1201463 (+) | 540 | WP_077446656.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACFIOJ_RS06165 | - | 1201475..1202938 (+) | 1464 | WP_054190029.1 | rhomboid family protein | - |
| ACFIOJ_RS06170 | - | 1202919..1203122 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ACFIOJ_RS06175 | - | 1203119..1204105 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| ACFIOJ_RS06180 | - | 1204105..1204434 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACFIOJ_RS06185 | - | 1204431..1205054 (+) | 624 | WP_054190028.1 | MBL fold metallo-hydrolase | - |
| ACFIOJ_RS06190 | comGA | 1205106..1206080 (+) | 975 | WP_054191886.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACFIOJ_RS06195 | comGB | 1206052..1207122 (+) | 1071 | WP_410533933.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACFIOJ_RS06200 | comGC | 1207136..1207447 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFIOJ_RS06205 | comGD | 1207425..1207871 (+) | 447 | WP_077446655.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACFIOJ_RS06210 | comGE | 1207858..1208157 (+) | 300 | WP_410533935.1 | competence protein ComGE | Machinery gene |
| ACFIOJ_RS06215 | comGF | 1208075..1208572 (+) | 498 | WP_410533936.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACFIOJ_RS06220 | - | 1208669..1208815 (+) | 147 | WP_410533937.1 | hypothetical protein | - |
| ACFIOJ_RS06225 | - | 1208805..1209329 (+) | 525 | WP_054190023.1 | shikimate kinase | - |
| ACFIOJ_RS06230 | gcvT | 1209488..1210579 (+) | 1092 | WP_410533939.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36912.97 Da Isoelectric Point: 8.6529
>NTDB_id=1056600 ACFIOJ_RS06190 WP_054191886.1 1205106..1206080(+) (comGA) [Staphylococcus aureus strain t21642]
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLIYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHDHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLIYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHDHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=1056600 ACFIOJ_RS06190 WP_054191886.1 1205106..1206080(+) (comGA) [Staphylococcus aureus strain t21642]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAATTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAAAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGTCCAACTGGTTCAGGTAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAGGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAGGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATGATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAATTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAAAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGTCCAACTGGTTCAGGTAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAGGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAGGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATGATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
99.383 |
100 |
0.994 |
| comGA | Staphylococcus aureus N315 |
99.383 |
100 |
0.994 |