Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AB0763_RS09115 | Genome accession | NZ_CP162601 |
| Coordinates | 2068125..2068385 (-) | Length | 86 a.a. |
| NCBI ID | WP_306100522.1 | Uniprot ID | A0AB39HKG1 |
| Organism | Vibrio sp. HB236076 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2063125..2073385
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0763_RS09090 (AB0763_09090) | - | 2063385..2064599 (+) | 1215 | WP_306100428.1 | pyridoxal phosphate-dependent aminotransferase | - |
| AB0763_RS09095 (AB0763_09095) | yfbR | 2064678..2065262 (+) | 585 | WP_306100429.1 | 5'-deoxynucleotidase | - |
| AB0763_RS09100 (AB0763_09100) | - | 2065285..2066592 (+) | 1308 | WP_306100430.1 | anti-phage deoxyguanosine triphosphatase | - |
| AB0763_RS09105 (AB0763_09105) | - | 2066783..2067406 (-) | 624 | WP_306100431.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| AB0763_RS09110 (AB0763_09110) | rrtA | 2067418..2067990 (+) | 573 | WP_306100432.1 | rhombosortase | - |
| AB0763_RS09115 (AB0763_09115) | comEA | 2068125..2068385 (-) | 261 | WP_306100522.1 | ComEA family DNA-binding protein | Machinery gene |
| AB0763_RS09120 (AB0763_09120) | ppiD | 2068631..2070502 (-) | 1872 | WP_306100433.1 | peptidylprolyl isomerase | - |
| AB0763_RS09125 (AB0763_09125) | - | 2070636..2070932 (-) | 297 | WP_306100434.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 86 a.a. Molecular weight: 9310.68 Da Isoelectric Point: 9.9275
>NTDB_id=1027400 AB0763_RS09115 WP_306100522.1 2068125..2068385(-) (comEA) [Vibrio sp. HB236076]
MVANTQVNPTINPVDKTLQGIEVTVNINQASTHELATLLTGVGEKKAQRIVDYRELNGPFTSVDSLTQVKGIGPALLAKN
RQRITL
MVANTQVNPTINPVDKTLQGIEVTVNINQASTHELATLLTGVGEKKAQRIVDYRELNGPFTSVDSLTQVKGIGPALLAKN
RQRITL
Nucleotide
Download Length: 261 bp
>NTDB_id=1027400 AB0763_RS09115 WP_306100522.1 2068125..2068385(-) (comEA) [Vibrio sp. HB236076]
GTGGTGGCCAACACGCAAGTGAATCCGACTATTAACCCGGTGGATAAAACGCTACAAGGCATTGAAGTGACAGTGAATAT
CAATCAAGCTTCAACTCATGAACTGGCGACGTTACTCACCGGGGTCGGGGAGAAAAAAGCGCAGCGTATCGTTGATTATC
GAGAGTTGAACGGCCCGTTTACCAGTGTCGACAGTTTAACGCAAGTGAAGGGAATCGGCCCGGCGTTGTTGGCTAAAAAC
CGCCAACGGATAACGTTATAA
GTGGTGGCCAACACGCAAGTGAATCCGACTATTAACCCGGTGGATAAAACGCTACAAGGCATTGAAGTGACAGTGAATAT
CAATCAAGCTTCAACTCATGAACTGGCGACGTTACTCACCGGGGTCGGGGAGAAAAAAGCGCAGCGTATCGTTGATTATC
GAGAGTTGAACGGCCCGTTTACCAGTGTCGACAGTTTAACGCAAGTGAAGGGAATCGGCCCGGCGTTGTTGGCTAAAAAC
CGCCAACGGATAACGTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
62.162 |
86.047 |
0.535 |
| comEA | Vibrio cholerae strain A1552 |
62.162 |
86.047 |
0.535 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
61.765 |
79.07 |
0.488 |
| comEA | Vibrio campbellii strain DS40M4 |
58.824 |
79.07 |
0.465 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.048 |
97.674 |
0.43 |
| comEA | Acinetobacter baylyi ADP1 |
55.224 |
77.907 |
0.43 |
| comEA | Acinetobacter baumannii strain A118 |
45.122 |
95.349 |
0.43 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
54.839 |
72.093 |
0.395 |
| comE | Neisseria gonorrhoeae MS11 |
52.381 |
73.256 |
0.384 |
| comE | Neisseria gonorrhoeae MS11 |
52.381 |
73.256 |
0.384 |
| comE | Neisseria gonorrhoeae MS11 |
52.381 |
73.256 |
0.384 |
| comE | Neisseria gonorrhoeae MS11 |
52.381 |
73.256 |
0.384 |
| comEA | Acinetobacter baumannii D1279779 |
50 |
72.093 |
0.36 |