Detailed information NTG1024683

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: AB1F57_RS00695
• Genome accession: NZ_CP162268
• Coordinates: 116818..117213 (+)
• Length: 131 a.a.
• NCBI ID: WP_105110718.1
• Uniprot ID: -
• Organism: Streptococcus sp. ZY1909104
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 111818..122213

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F57_RS00660 (AB1F57_00660)	-	112089..112475 (-)	387	WP_167785083.1	DUF6176 family protein	-
AB1F57_RS00665 (AB1F57_00665)	pepA	112485..113546 (-)	1062	WP_367985903.1	glutamyl aminopeptidase	-
AB1F57_RS00670 (AB1F57_00670)	-	113610..113894 (+)	285	WP_105137577.1	DUF4651 domain-containing protein	-
AB1F57_RS00675 (AB1F57_00675)	-	113891..114211 (+)	321	WP_105110722.1	thioredoxin family protein	-
AB1F57_RS00680 (AB1F57_00680)	-	114208..115164 (+)	957	WP_167785085.1	DUF1002 domain-containing protein	-
AB1F57_RS00685 (AB1F57_00685)	ytpR	115183..115806 (+)	624	WP_105137579.1	YtpR family tRNA-binding protein	-
AB1F57_RS00690 (AB1F57_00690)	-	115996..116766 (-)	771	WP_367985905.1	DUF2785 domain-containing protein	-
AB1F57_RS00695 (AB1F57_00695)	ssbA	116818..117213 (+)	396	WP_105110718.1	single-stranded DNA-binding protein	Machinery gene
AB1F57_RS00700 (AB1F57_00700)	-	117539..117793 (-)	255	WP_105137581.1	hypothetical protein	-
AB1F57_RS00705 (AB1F57_00705)	groES	117984..118265 (+)	282	WP_105110716.1	co-chaperone GroES	-
AB1F57_RS00710 (AB1F57_00710)	-	118273..118623 (+)	351	WP_167785087.1	hypothetical protein	-
AB1F57_RS00715 (AB1F57_00715)	groL	118664..120289 (+)	1626	WP_167785088.1	chaperonin GroEL	-
AB1F57_RS00720 (AB1F57_00720)	-	120396..120842 (-)	447	WP_367985907.1	GNAT family N-acetyltransferase	-
AB1F57_RS00725 (AB1F57_00725)	-	120989..121831 (+)	843	WP_367985908.1	patatin family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14822.71 Da
• Isoelectric Point: 5.0114

>NTDB_id=1024683 AB1F57_RS00695 WP_105110718.1 116818..117213(+) (ssbA) [Streptococcus sp. ZY1909104]
MYNKVILIGRLTAQPELTQTPSGKNLTRVTVAVNRRFKTESGEREADFINIIFWGKLAETLVSYGSKGSLISLDGELRTR
KYEKDGNNHYVTEVLGNSFQLLESRAQRAMRENNAGEDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1024683 AB1F57_RS00695 WP_105110718.1 116818..117213(+) (ssbA) [Streptococcus sp. ZY1909104]
ATGTACAATAAAGTTATCTTAATTGGTCGTTTGACGGCCCAGCCTGAGTTGACGCAGACGCCGTCGGGAAAAAATTTAAC
CCGCGTTACAGTTGCTGTCAATCGTCGCTTCAAGACAGAGTCTGGTGAGCGCGAAGCGGATTTCATCAATATCATTTTCT
GGGGTAAATTGGCTGAAACTCTGGTGTCCTACGGTAGCAAGGGCAGCTTGATTTCCCTTGACGGAGAGCTCCGTACTCGT
AAATATGAAAAAGATGGTAATAACCATTATGTGACTGAAGTCCTTGGAAACAGTTTCCAGTTGCTCGAAAGTCGTGCCCA
ACGCGCCATGCGTGAAAATAATGCTGGCGAAGACCTGGCTGACCTGGTTCTAGAAGAGGAGGAACTGCCCTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	77.863	100	0.779
ssbB	Streptococcus sobrinus strain NIDR 6715-7	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae TIGR4	73.282	100	0.733
ssbB/cilA	Streptococcus pneumoniae R6	72.519	100	0.725
ssbB/cilA	Streptococcus mitis SK321	72.519	100	0.725
ssbB/cilA	Streptococcus mitis NCTC 12261	72.519	100	0.725
ssbB/cilA	Streptococcus pneumoniae Rx1	72.519	100	0.725
ssbB/cilA	Streptococcus pneumoniae D39	72.519	100	0.725
ssbB	Lactococcus lactis subsp. cremoris KW2	64.286	85.496	0.55
ssb	Latilactobacillus sakei subsp. sakei 23K	46.903	86.26	0.405
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405
ssbB	Bacillus subtilis subsp. subtilis str. 168	46.226	80.916	0.374