Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | ABZN20_RS02480 | Genome accession | NZ_CP160399 |
| Coordinates | 524723..525136 (+) | Length | 137 a.a. |
| NCBI ID | WP_218806547.1 | Uniprot ID | - |
| Organism | Methylococcus sp. ANG | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 519723..530136
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABZN20_RS02465 (ABZN20_02465) | - | 520352..521968 (+) | 1617 | WP_367026644.1 | tetratricopeptide repeat protein | - |
| ABZN20_RS02470 (ABZN20_02470) | istB | 522050..522805 (-) | 756 | WP_367025276.1 | IS21-like element helper ATPase IstB | - |
| ABZN20_RS02475 (ABZN20_02475) | istA | 522832..524370 (-) | 1539 | WP_367025277.1 | IS21 family transposase | - |
| ABZN20_RS02480 (ABZN20_02480) | comP | 524723..525136 (+) | 414 | WP_218806547.1 | pilin | Machinery gene |
| ABZN20_RS02485 (ABZN20_02485) | - | 525187..527220 (-) | 2034 | WP_218806548.1 | tetratricopeptide repeat protein | - |
| ABZN20_RS02490 (ABZN20_02490) | - | 527251..528273 (-) | 1023 | WP_218806549.1 | glycosyltransferase | - |
| ABZN20_RS02495 (ABZN20_02495) | - | 528345..529463 (-) | 1119 | WP_218806550.1 | DegT/DnrJ/EryC1/StrS aminotransferase family protein | - |
| ABZN20_RS02500 (ABZN20_02500) | - | 529451..529861 (-) | 411 | WP_218806551.1 | FdtA/QdtA family cupin domain-containing protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14002.26 Da Isoelectric Point: 8.8409
>NTDB_id=1020885 ABZN20_RS02480 WP_218806547.1 524723..525136(+) (comP) [Methylococcus sp. ANG]
MKAVQKGFTLIELMIVVAIIGVLAAVALPAYQDYTVRAKVSELLLTAAKYRTDITEKCQLAGTCTASGTSLTVQIGGKIT
GGSVSDDGIVKIKGSTATDSVGAAVSITLTPSWNSAMGSAVWSCTGAPARYVPGSCR
MKAVQKGFTLIELMIVVAIIGVLAAVALPAYQDYTVRAKVSELLLTAAKYRTDITEKCQLAGTCTASGTSLTVQIGGKIT
GGSVSDDGIVKIKGSTATDSVGAAVSITLTPSWNSAMGSAVWSCTGAPARYVPGSCR
Nucleotide
Download Length: 414 bp
>NTDB_id=1020885 ABZN20_RS02480 WP_218806547.1 524723..525136(+) (comP) [Methylococcus sp. ANG]
ATGAAAGCGGTGCAAAAAGGTTTTACATTGATCGAGCTGATGATCGTCGTGGCGATCATCGGCGTCTTGGCCGCGGTCGC
CTTGCCGGCCTACCAGGACTATACGGTTCGGGCCAAGGTTTCAGAACTGCTTCTCACGGCTGCGAAATATCGAACCGACA
TCACTGAAAAATGCCAGTTGGCTGGTACTTGTACCGCTTCTGGGACCAGTCTGACAGTCCAAATTGGTGGAAAGATAACG
GGCGGTAGCGTTAGCGACGATGGAATTGTCAAAATAAAGGGAAGTACGGCAACTGATAGCGTAGGTGCGGCTGTAAGTAT
TACGCTTACTCCAAGCTGGAACTCGGCAATGGGGTCGGCTGTTTGGTCGTGCACCGGTGCGCCGGCCAGATACGTACCAG
GCTCGTGCCGCTGA
ATGAAAGCGGTGCAAAAAGGTTTTACATTGATCGAGCTGATGATCGTCGTGGCGATCATCGGCGTCTTGGCCGCGGTCGC
CTTGCCGGCCTACCAGGACTATACGGTTCGGGCCAAGGTTTCAGAACTGCTTCTCACGGCTGCGAAATATCGAACCGACA
TCACTGAAAAATGCCAGTTGGCTGGTACTTGTACCGCTTCTGGGACCAGTCTGACAGTCCAAATTGGTGGAAAGATAACG
GGCGGTAGCGTTAGCGACGATGGAATTGTCAAAATAAAGGGAAGTACGGCAACTGATAGCGTAGGTGCGGCTGTAAGTAT
TACGCTTACTCCAAGCTGGAACTCGGCAATGGGGTCGGCTGTTTGGTCGTGCACCGGTGCGCCGGCCAGATACGTACCAG
GCTCGTGCCGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
42.581 |
100 |
0.482 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.364 |
100 |
0.438 |
| pilA2 | Legionella pneumophila str. Paris |
42.446 |
100 |
0.431 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
42.446 |
100 |
0.431 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36.478 |
100 |
0.423 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
40 |
100 |
0.423 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
35.333 |
100 |
0.387 |
| pilA/pilA1 | Eikenella corrodens VA1 |
34.211 |
100 |
0.38 |
| pilA | Haemophilus influenzae 86-028NP |
36.364 |
100 |
0.38 |
| pilA | Pseudomonas aeruginosa PAK |
33.548 |
100 |
0.38 |