Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   AB0R82_RS19235 Genome accession   NZ_CP160220
Coordinates   3724497..3724616 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain JM553     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3719497..3729616
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R82_RS19210 (AB0R82_19210) albG 3719660..3720361 (+) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  AB0R82_RS19215 (AB0R82_19215) ywhL 3720367..3721743 (-) 1377 WP_198878427.1 YncE family protein -
  AB0R82_RS19220 (AB0R82_19220) ywhK 3721783..3723138 (-) 1356 WP_069322965.1 YncE family protein -
  AB0R82_RS19225 (AB0R82_19225) - 3723135..3723365 (-) 231 WP_326256832.1 hypothetical protein -
  AB0R82_RS19230 (AB0R82_19230) rapF 3723368..3724513 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  AB0R82_RS19235 (AB0R82_19235) phrF 3724497..3724616 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  AB0R82_RS19240 (AB0R82_19240) ywhH 3724732..3725180 (+) 449 Protein_3730 YbaK/EbsC family protein -
  AB0R82_RS19245 (AB0R82_19245) speB 3725211..3726083 (-) 873 WP_198878426.1 agmatinase -
  AB0R82_RS19250 (AB0R82_19250) speE 3726144..3726974 (-) 831 WP_003227543.1 spermidine synthase -
  AB0R82_RS19255 (AB0R82_19255) pbpG 3727176..3729251 (+) 2076 WP_046664002.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1019730 AB0R82_RS19235 WP_009968329.1 3724497..3724616(+) (phrF) [Bacillus subtilis strain JM553]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1019730 AB0R82_RS19235 WP_009968329.1 3724497..3724616(+) (phrF) [Bacillus subtilis strain JM553]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment