Detailed information NTG1018003

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ABZS47_RS03425
• Genome accession: NZ_CP160099
• Coordinates: 734806..735411 (+)
• Length: 201 a.a.
• NCBI ID: WP_412471354.1
• Uniprot ID: -
• Organism: Moraxella catarrhalis strain A_01_mct
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 729806..740411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZS47_RS03405 (ABZS47_03410)	pilM	730839..732716 (+)	1878	WP_003657658.1	pilus assembly protein PilM	-
ABZS47_RS03410 (ABZS47_03415)	-	732709..733347 (+)	639	WP_003657657.1	type 4a pilus biogenesis protein PilO	-
ABZS47_RS03415 (ABZS47_03420)	-	733337..733987 (+)	651	WP_003657655.1	pilus assembly protein PilP	-
ABZS47_RS03420 (ABZS47_03425)	-	733991..734854 (+)	864	WP_412471353.1	secretin N-terminal domain-containing protein	-
ABZS47_RS03425 (ABZS47_03430)	pilQ	734806..735411 (+)	606	WP_412471354.1	hypothetical protein	Machinery gene
ABZS47_RS03430 (ABZS47_03435)	-	735643..736242 (+)	600	WP_371258030.1	shikimate kinase	-
ABZS47_RS03435 (ABZS47_03440)	aroB	736239..737357 (+)	1119	WP_003657652.1	3-dehydroquinate synthase	-
ABZS47_RS03440 (ABZS47_03445)	-	737370..738314 (+)	945	WP_003657651.1	hypothetical protein	-
ABZS47_RS03445 (ABZS47_03450)	-	738335..738961 (+)	627	WP_003657650.1	carbonic anhydrase	-
ABZS47_RS03450 (ABZS47_03455)	gloA	739002..739538 (+)	537	WP_003657649.1	lactoylglutathione lyase	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 21616.65 Da
• Isoelectric Point: 6.2283

>NTDB_id=1018003 ABZS47_RS03425 WP_412471354.1 734806..735411(+) (pilQ) [Moraxella catarrhalis strain A_01_mct]
MRQEGVAAGGHQNSHLNVDLGVDNAMGRIAFGLLNLPDIILDLELSAMQAENQGEVISTPKVLTADKQTARISSGLQIPY
QETTHSGASTTKFKEASLILEATPNITPDGKIGLKLNIKNGNPVPTLGHIAIQEDAIETNVIIEDGQTVVLGGIYRTSQN
EGANKVPRLGDMPVLGRLFRHDSKAHDKSELLIFITPKLVR

Nucleotide

• Length: 606 bp

>NTDB_id=1018003 ABZS47_RS03425 WP_412471354.1 734806..735411(+) (pilQ) [Moraxella catarrhalis strain A_01_mct]
ATGCGGCAAGAGGGTGTGGCGGCAGGTGGTCATCAAAACAGTCATCTGAATGTTGATTTGGGCGTAGATAACGCCATGGG
ACGCATTGCTTTTGGGCTGTTAAATTTACCTGATATCATTTTAGATTTAGAACTCTCCGCCATGCAGGCAGAAAATCAAG
GTGAGGTTATCTCAACACCAAAAGTCTTGACGGCTGATAAACAAACCGCGCGTATTTCATCAGGGCTACAAATTCCTTAT
CAAGAAACCACGCATTCAGGTGCCAGCACAACAAAATTTAAAGAAGCGTCTTTAATTTTGGAGGCGACACCAAATATCAC
ACCTGATGGTAAAATTGGTCTTAAGCTAAATATCAAAAATGGCAATCCAGTACCAACACTTGGTCATATCGCCATCCAAG
AAGATGCCATCGAAACGAATGTCATCATCGAAGATGGACAAACCGTCGTTCTTGGTGGTATCTATCGCACCAGCCAGAAT
GAAGGTGCAAATAAAGTGCCTAGATTGGGTGATATGCCTGTGCTTGGACGATTGTTTCGGCATGATTCCAAAGCGCATGA
TAAGTCGGAGCTTTTGATTTTTATTACACCCAAATTGGTAAGATAG

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (47-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	54.167	95.522	0.517
pilQ	Acinetobacter baumannii strain A118	54.167	95.522	0.517
comQ	Acinetobacter baylyi ADP1	53.646	95.522	0.512
pilQ	Vibrio cholerae strain A1552	45.455	100	0.473
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	45.455	100	0.473
pilQ	Legionella pneumophila strain Lp02	46.392	96.517	0.448
pilQ	Legionella pneumophila strain ERS1305867	46.392	96.517	0.448
pilQ	Vibrio campbellii strain DS40M4	44.898	97.512	0.438
pilQ	Pseudomonas aeruginosa PAK	42.932	95.025	0.408
comE	Glaesserella parasuis strain SC1401	37.755	97.512	0.368
comE	Haemophilus influenzae Rd KW20	37.629	96.517	0.363
comE	Haemophilus influenzae 86-028NP	37.629	96.517	0.363