Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | ABU614_RS11730 | Genome accession | NZ_CP159925 |
| Coordinates | 2707607..2708020 (-) | Length | 137 a.a. |
| NCBI ID | WP_363796236.1 | Uniprot ID | A0AAU8MKZ7 |
| Organism | Lysobacter firmicutimachus strain SR10 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2702607..2713020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABU614_RS11710 (ABU614_11710) | - | 2702854..2703534 (+) | 681 | WP_141233329.1 | hypothetical protein | - |
| ABU614_RS11715 (ABU614_11715) | - | 2703531..2704586 (+) | 1056 | WP_141233330.1 | hypothetical protein | - |
| ABU614_RS11720 (ABU614_11720) | - | 2704579..2705505 (+) | 927 | WP_336131239.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| ABU614_RS11725 (ABU614_11725) | - | 2705588..2707480 (-) | 1893 | WP_363796235.1 | hypothetical protein | - |
| ABU614_RS11730 (ABU614_11730) | pilA2 | 2707607..2708020 (-) | 414 | WP_363796236.1 | pilin | Machinery gene |
| ABU614_RS11735 (ABU614_11735) | pilA2 | 2708386..2708817 (-) | 432 | WP_363796237.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ABU614_RS11740 (ABU614_11740) | pilR | 2709590..2711005 (-) | 1416 | WP_064746446.1 | sigma-54 dependent transcriptional regulator | Regulator |
| ABU614_RS11745 (ABU614_11745) | - | 2711099..2712724 (-) | 1626 | WP_336131245.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14084.18 Da Isoelectric Point: 4.9427
>NTDB_id=1016821 ABU614_RS11730 WP_363796236.1 2707607..2708020(-) (pilA2) [Lysobacter firmicutimachus strain SR10]
MKPQKGFTLIELMIVIAILGILIAIALPGYLDYTTRTKNSECLNVAAAAKLAVAETAQDRGSLAAVTAANTGYSFIASSY
CASVDIGANGVITAVSSPQNSNAVTFTLSPTASAGRLEWDCSVPAGTNLTLVPAECR
MKPQKGFTLIELMIVIAILGILIAIALPGYLDYTTRTKNSECLNVAAAAKLAVAETAQDRGSLAAVTAANTGYSFIASSY
CASVDIGANGVITAVSSPQNSNAVTFTLSPTASAGRLEWDCSVPAGTNLTLVPAECR
Nucleotide
Download Length: 414 bp
>NTDB_id=1016821 ABU614_RS11730 WP_363796236.1 2707607..2708020(-) (pilA2) [Lysobacter firmicutimachus strain SR10]
ATGAAGCCGCAAAAGGGTTTTACTTTGATCGAGCTGATGATCGTCATCGCGATCCTCGGCATCCTGATCGCCATCGCCTT
GCCGGGCTATCTGGACTACACCACCCGGACCAAGAACTCCGAATGCCTCAACGTCGCCGCCGCCGCCAAGCTGGCGGTAG
CCGAGACCGCGCAAGACCGCGGCAGCCTCGCGGCGGTCACCGCTGCGAACACCGGCTACAGCTTCATCGCGTCGAGCTAC
TGCGCGAGCGTCGATATCGGCGCCAACGGAGTGATCACCGCCGTGTCCTCGCCGCAGAACAGCAACGCGGTGACGTTCAC
CCTGAGTCCGACCGCTTCGGCCGGCCGACTGGAGTGGGACTGCAGCGTGCCTGCCGGCACCAATCTGACGCTGGTGCCCG
CGGAGTGCCGCTAA
ATGAAGCCGCAAAAGGGTTTTACTTTGATCGAGCTGATGATCGTCATCGCGATCCTCGGCATCCTGATCGCCATCGCCTT
GCCGGGCTATCTGGACTACACCACCCGGACCAAGAACTCCGAATGCCTCAACGTCGCCGCCGCCGCCAAGCTGGCGGTAG
CCGAGACCGCGCAAGACCGCGGCAGCCTCGCGGCGGTCACCGCTGCGAACACCGGCTACAGCTTCATCGCGTCGAGCTAC
TGCGCGAGCGTCGATATCGGCGCCAACGGAGTGATCACCGCCGTGTCCTCGCCGCAGAACAGCAACGCGGTGACGTTCAC
CCTGAGTCCGACCGCTTCGGCCGGCCGACTGGAGTGGGACTGCAGCGTGCCTGCCGGCACCAATCTGACGCTGGTGCCCG
CGGAGTGCCGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
51.095 |
100 |
0.511 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
50.365 |
100 |
0.504 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.42 |
100 |
0.431 |
| comP | Acinetobacter baylyi ADP1 |
39.865 |
100 |
0.431 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.908 |
100 |
0.423 |
| pilE | Neisseria gonorrhoeae MS11 |
41.221 |
95.62 |
0.394 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
40.458 |
95.62 |
0.387 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
39.394 |
96.35 |
0.38 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.6 |
91.241 |
0.38 |