Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | ABU614_RS11735 | Genome accession | NZ_CP159925 |
| Coordinates | 2708386..2708817 (-) | Length | 143 a.a. |
| NCBI ID | WP_363796237.1 | Uniprot ID | A0AAU8MKR7 |
| Organism | Lysobacter firmicutimachus strain SR10 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2703386..2713817
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABU614_RS11715 (ABU614_11715) | - | 2703531..2704586 (+) | 1056 | WP_141233330.1 | hypothetical protein | - |
| ABU614_RS11720 (ABU614_11720) | - | 2704579..2705505 (+) | 927 | WP_336131239.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| ABU614_RS11725 (ABU614_11725) | - | 2705588..2707480 (-) | 1893 | WP_363796235.1 | hypothetical protein | - |
| ABU614_RS11730 (ABU614_11730) | pilA2 | 2707607..2708020 (-) | 414 | WP_363796236.1 | pilin | Machinery gene |
| ABU614_RS11735 (ABU614_11735) | pilA2 | 2708386..2708817 (-) | 432 | WP_363796237.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ABU614_RS11740 (ABU614_11740) | pilR | 2709590..2711005 (-) | 1416 | WP_064746446.1 | sigma-54 dependent transcriptional regulator | Regulator |
| ABU614_RS11745 (ABU614_11745) | - | 2711099..2712724 (-) | 1626 | WP_336131245.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 14844.01 Da Isoelectric Point: 5.0160
>NTDB_id=1016822 ABU614_RS11735 WP_363796237.1 2708386..2708817(-) (pilA2) [Lysobacter firmicutimachus strain SR10]
MKKQQGFTLIELMIVIAILGILIAIALPAYQDYTVRTKNAECLNVAAAAKLAVSETAQDRGSLAQVTQANTGYSFVASSY
CTSVIIGDGTGVITATTDGDTPGTGGAQVAFTLSPTLRAGRIEWDCSVPAGTKMSQVPAECRP
MKKQQGFTLIELMIVIAILGILIAIALPAYQDYTVRTKNAECLNVAAAAKLAVSETAQDRGSLAQVTQANTGYSFVASSY
CTSVIIGDGTGVITATTDGDTPGTGGAQVAFTLSPTLRAGRIEWDCSVPAGTKMSQVPAECRP
Nucleotide
Download Length: 432 bp
>NTDB_id=1016822 ABU614_RS11735 WP_363796237.1 2708386..2708817(-) (pilA2) [Lysobacter firmicutimachus strain SR10]
ATGAAGAAGCAGCAAGGCTTTACCCTGATCGAACTGATGATCGTCATCGCGATCCTGGGCATCCTGATCGCCATCGCCCT
GCCGGCCTACCAGGACTACACCGTTCGCACCAAGAACGCCGAGTGCCTGAACGTCGCCGCCGCCGCCAAGCTGGCCGTGT
CGGAAACCGCTCAGGACCGTGGCTCGCTGGCCCAGGTCACCCAGGCCAACACCGGTTACAGCTTCGTCGCTTCGAGCTAC
TGCACGAGCGTGATCATCGGTGACGGCACCGGCGTCATCACCGCCACCACCGACGGCGACACCCCGGGCACCGGTGGTGC
GCAGGTGGCCTTCACCCTGTCTCCGACTCTGCGCGCTGGCCGCATCGAATGGGATTGCTCGGTCCCGGCCGGCACCAAGA
TGTCGCAGGTCCCGGCCGAGTGCCGCCCGTAA
ATGAAGAAGCAGCAAGGCTTTACCCTGATCGAACTGATGATCGTCATCGCGATCCTGGGCATCCTGATCGCCATCGCCCT
GCCGGCCTACCAGGACTACACCGTTCGCACCAAGAACGCCGAGTGCCTGAACGTCGCCGCCGCCGCCAAGCTGGCCGTGT
CGGAAACCGCTCAGGACCGTGGCTCGCTGGCCCAGGTCACCCAGGCCAACACCGGTTACAGCTTCGTCGCTTCGAGCTAC
TGCACGAGCGTGATCATCGGTGACGGCACCGGCGTCATCACCGCCACCACCGACGGCGACACCCCGGGCACCGGTGGTGC
GCAGGTGGCCTTCACCCTGTCTCCGACTCTGCGCGCTGGCCGCATCGAATGGGATTGCTCGGTCCCGGCCGGCACCAAGA
TGTCGCAGGTCCCGGCCGAGTGCCGCCCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
51.389 |
100 |
0.517 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
51.389 |
100 |
0.517 |
| comP | Acinetobacter baylyi ADP1 |
42.857 |
100 |
0.462 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
39.157 |
100 |
0.455 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.364 |
100 |
0.42 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
39.286 |
97.902 |
0.385 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
38.849 |
97.203 |
0.378 |