Detailed information NTG1016667

Bioinformatically predicted

Overview

• Name: covS
• Type: Regulator
• Locus tag: ABG809_RS08040
• Genome accession: NZ_CP159893
• Coordinates: 1645375..1645626 (-)
• Length: 83 a.a.
• NCBI ID: WP_367561173.1
• Uniprot ID: -
• Organism: Streptococcus iniae strain QMA0177
• Function: repress the expression of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1640375..1650626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABG809_RS08010 (ABG809_08010)	-	1640651..1641124 (-)	474	WP_003101277.1	hypothetical protein	-
ABG809_RS08015 (ABG809_08015)	phoU	1641331..1641984 (-)	654	WP_003101279.1	phosphate signaling complex protein PhoU	-
ABG809_RS08020 (ABG809_08020)	-	1641998..1642609 (-)	612	WP_016356076.1	phosphate ABC transporter ATP-binding protein	-
ABG809_RS08025 (ABG809_08025)	pstA	1642612..1643427 (-)	816	WP_003101283.1	phosphate ABC transporter permease PstA	-
ABG809_RS08030 (ABG809_08030)	pstC	1643420..1644283 (-)	864	WP_003101285.1	phosphate ABC transporter permease subunit PstC	-
ABG809_RS08035 (ABG809_08035)	-	1644346..1645221 (-)	876	WP_003101287.1	substrate-binding domain-containing protein	-
ABG809_RS08040 (ABG809_08040)	covS	1645375..1645626 (-)	252	WP_367561173.1	sensor histidine kinase	Regulator
ABG809_RS08045 (ABG809_08045)	-	1645605..1645805 (-)	201	WP_367561174.1	hypothetical protein	-
ABG809_RS08050 (ABG809_08050)	-	1645823..1646614 (-)	792	WP_367561175.1	histidine kinase dimerization/phospho-acceptor domain-containing protein	-
ABG809_RS08055 (ABG809_08055)	vicR	1646684..1647409 (-)	726	WP_003101290.1	response regulator transcription factor	Regulator
ABG809_RS08060 (ABG809_08060)	-	1647505..1647888 (-)	384	WP_003101292.1	VOC family protein	-
ABG809_RS08065 (ABG809_08065)	-	1648081..1648224 (+)	144	WP_003101294.1	SPJ_0845 family protein	-
ABG809_RS08070 (ABG809_08070)	-	1648224..1649129 (+)	906	WP_003101296.1	permease	-
ABG809_RS08075 (ABG809_08075)	-	1649126..1649941 (+)	816	WP_003101297.1	TIGR03943 family protein	-

Sequence

Protein

• Length: 83 a.a.
• Molecular weight: 9098.48 Da
• Isoelectric Point: 10.3534

>NTDB_id=1016667 ABG809_RS08040 WP_367561173.1 1645375..1645626(-) (covS) [Streptococcus iniae strain QMA0177]
MQKSIALSISDTGIGISQLEIDRIFERFYRVNKGRSRQSGGTGLGLSIVKELSQLLGGQVSVKSQLGRGSQFTLEFPKEL
IEI

Nucleotide

• Length: 252 bp

>NTDB_id=1016667 ABG809_RS08040 WP_367561173.1 1645375..1645626(-) (covS) [Streptococcus iniae strain QMA0177]
TTGCAAAAGAGCATTGCTTTAAGCATCTCAGATACTGGAATAGGTATTAGTCAATTGGAAATTGATCGTATTTTTGAACG
CTTTTATCGAGTCAATAAAGGGCGTAGCCGTCAGAGTGGCGGAACAGGTCTAGGTTTATCTATTGTCAAAGAGCTTAGTC
AGCTTTTAGGAGGACAAGTCAGTGTTAAAAGCCAGCTTGGTAGAGGCAGTCAGTTTACCTTAGAATTTCCAAAAGAACTT
ATTGAAATATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (5-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
covS	Lactococcus lactis subsp. lactis strain DGCC12653	56.338	85.542	0.482
micB	Streptococcus pneumoniae Cp1015	50	93.976	0.47
vicK	Streptococcus mutans UA159	52.055	87.952	0.458
ciaH	Streptococcus pneumoniae R6	48.571	84.337	0.41
ciaH	Streptococcus pneumoniae TIGR4	48.571	84.337	0.41
ciaH	Streptococcus pneumoniae Rx1	48.571	84.337	0.41
ciaH	Streptococcus pneumoniae D39	48.571	84.337	0.41
luxQ	Vibrio cholerae strain A1552	41.026	93.976	0.386
braS	Staphylococcus aureus N315	41.026	93.976	0.386
ciaH	Streptococcus mutans UA159	45.714	84.337	0.386
covS	Streptococcus salivarius strain HSISS4	37.975	95.181	0.361
lqsT	Legionella pneumophila subsp. pneumophila str. Philadelphia 1	41.667	86.747	0.361