Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ABM478_RS10650 | Genome accession | NZ_CP157848 |
| Coordinates | 2056206..2056541 (+) | Length | 111 a.a. |
| NCBI ID | WP_000982017.1 | Uniprot ID | A0A9W5L6E7 |
| Organism | Bacillus cereus strain B9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2051206..2061541
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABM478_RS10625 | - | 2051401..2052228 (-) | 828 | WP_000499733.1 | hypothetical protein | - |
| ABM478_RS10630 | - | 2052338..2052985 (+) | 648 | WP_000165966.1 | HD domain-containing protein | - |
| ABM478_RS10635 | - | 2052982..2054877 (+) | 1896 | WP_000783160.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| ABM478_RS10640 | - | 2054953..2055684 (+) | 732 | WP_001260655.1 | Bax inhibitor-1/YccA family protein | - |
| ABM478_RS10645 | - | 2055790..2056044 (+) | 255 | WP_000975138.1 | DUF4318 domain-containing protein | - |
| ABM478_RS10650 | ssbA | 2056206..2056541 (+) | 336 | WP_000982017.1 | single-stranded DNA-binding protein | Machinery gene |
| ABM478_RS10655 | - | 2056790..2057917 (+) | 1128 | WP_349916983.1 | conserved virulence factor C family protein | - |
| ABM478_RS10660 | - | 2057921..2058304 (+) | 384 | WP_000634907.1 | DCC1-like thiol-disulfide oxidoreductase family protein | - |
| ABM478_RS10665 | - | 2058388..2058822 (+) | 435 | WP_000063706.1 | BrxA/BrxB family bacilliredoxin | - |
| ABM478_RS10670 | - | 2058872..2059648 (+) | 777 | WP_000637455.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12797.69 Da Isoelectric Point: 9.4344
>NTDB_id=1008475 ABM478_RS10650 WP_000982017.1 2056206..2056541(+) (ssbA) [Bacillus cereus strain B9]
MMNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCKKGSLVGITGRIQTS
NYDDEQGKRIYRTEVVIESITFLERRREGAL
MMNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCKKGSLVGITGRIQTS
NYDDEQGKRIYRTEVVIESITFLERRREGAL
Nucleotide
Download Length: 336 bp
>NTDB_id=1008475 ABM478_RS10650 WP_000982017.1 2056206..2056541(+) (ssbA) [Bacillus cereus strain B9]
ATGATGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAACAAGGCGTTGCTTATGC
ACGAATATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTCGATTTTATTAATTGTGTCGTTT
GGCGCAAATCGGCTGAGAATGTAACTGAATATTGTAAGAAGGGGTCGCTCGTTGGGATTACAGGGCGTATTCAGACTAGT
AATTACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGCG
GGAGGGGGCATTGTAA
ATGATGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAACAAGGCGTTGCTTATGC
ACGAATATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTCGATTTTATTAATTGTGTCGTTT
GGCGCAAATCGGCTGAGAATGTAACTGAATATTGTAAGAAGGGGTCGCTCGTTGGGATTACAGGGCGTATTCAGACTAGT
AATTACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGCG
GGAGGGGGCATTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
95.495 |
0.559 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.66 |
95.495 |
0.532 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
51.351 |
100 |
0.514 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
45.455 |
99.099 |
0.45 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
44.144 |
100 |
0.441 |
| ssbA | Streptococcus mutans UA159 |
39.64 |
100 |
0.396 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
39.64 |
100 |
0.396 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
39.64 |
100 |
0.396 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
38.739 |
100 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
38.739 |
100 |
0.387 |
| ssbB/cilA | Streptococcus mitis SK321 |
38.739 |
100 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
38.739 |
100 |
0.387 |