Detailed information NTG1005446

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: FGL16_RS01275
• Genome accession: NZ_LR594043
• Coordinates: 211746..214238 (-)
• Length: 830 a.a.
• NCBI ID: WP_014735352.1
• Uniprot ID: -
• Organism: Streptococcus suis strain NCTC10237
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 206746..219238

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL16_RS01250 (NCTC10237_00237)	dinB	207388..208455 (+)	1068	WP_014735346.1	DNA polymerase IV	-
FGL16_RS01255 (NCTC10237_00238)	-	208498..208917 (+)	420	WP_014735347.1	Rrf2 family transcriptional regulator	-
FGL16_RS01260 (NCTC10237_00239)	-	209156..209782 (+)	627	WP_014735348.1	NAD(P)-dependent oxidoreductase	-
FGL16_RS01265 (NCTC10237_00240)	-	209886..210806 (+)	921	WP_014735349.1	PfkB family carbohydrate kinase	-
FGL16_RS01270 (NCTC10237_00241)	-	210945..211640 (-)	696	WP_014735351.1	hypothetical protein	-
FGL16_RS01275 (NCTC10237_00242)	recD/recD2/recDB	211746..214238 (-)	2493	WP_014735352.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FGL16_RS01280 (NCTC10237_00243)	lepB	214609..215238 (-)	630	WP_011921809.1	signal peptidase I	-
FGL16_RS01285 (NCTC10237_00244)	rnhC	215248..216138 (-)	891	WP_012774927.1	ribonuclease HIII	-
FGL16_RS01290 (NCTC10237_00245)	-	216223..217206 (+)	984	WP_014735354.1	Gfo/Idh/MocA family oxidoreductase	-
FGL16_RS01300 (NCTC10237_00246)	-	217555..218715 (+)	1161	WP_014917188.1	LysM domain-containing protein	-

Sequence

Protein

• Length: 830 a.a.
• Molecular weight: 93205.52 Da
• Isoelectric Point: 4.5615

>NTDB_id=1005446 FGL16_RS01275 WP_014735352.1 211746..214238(-) (recD/recD2/recDB) [Streptococcus suis strain NCTC10237]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAKELTRLIADDKVQQEGTKIFDNSLYFAEHGIHTNLTRLMGKNGFKPFPRADVEAA
IAELESISSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQDSKEALAEKAESKTVATTQTQPPTQPDRKEQVKVGKENNLQLSLLDQDQPEKTSPQPT
EYILTVDNLLTIDPMIGIEQADIEEFFNLK

Nucleotide

• Length: 2493 bp

>NTDB_id=1005446 FGL16_RS01275 WP_014735352.1 211746..214238(-) (recD/recD2/recDB) [Streptococcus suis strain NCTC10237]
ATGAACGAAGTGTATTTTACCGGTACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAAATCCTTCTCCT
TGAAATCGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACCGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAGCAGCTGCAAATTTCGCGTTACGAACGCAGC
AAGCCTACCTCAGCTGGTCTGGTCAAGTATTTCTCCAGCGAGCATTTCAAGGGAATTGGACGCAAAACAGCTGAAAAAAT
CGTTGAGCTCTATGGCGAAGATACCATTGATAAGATTTTAGCTGAACCTGAAAAACTAACCCAAATCACAGGCCTATCCA
GCAAGAACATGCAGGCATTTGTCGAAAAACTCCGCCTCAATTATGGAACCGAGTTGATCTTGGCAAAACTAGCCGAGTAT
GGCATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAGTATAAGGAAAAAACACTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAGGGGCTCGGCTTTACCATTGCCGATAGGATTGCGGAAAATCTAGGAATTGCCAGTGATT
CACCCCAACGTTTTCGGGCTGGCATGCTCTTTAGTCTCATTCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCAACCCTTGAACTGCTGGAAAAATCCCGCCATACAGAGCTGGACCCCGCTGCTGTTGCCAAAGA
ATTGACGAGACTGATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGACAACAGCCTCTACTTTGCCGAAC
ATGGTATCCATACAAACCTAACTCGCCTGATGGGAAAAAACGGCTTCAAGCCCTTCCCACGCGCAGACGTCGAGGCTGCC
ATAGCAGAGCTGGAAAGCATATCTTCTCTCACCTACGATGACATTCAAAAAGAAGCCATCGTCCAAGCCATTACCAATCC
GCTTTTCATTCTGACAGGCGGACCAGGGACTGGAAAAACAACGGTTATCAACGGTATTATCGCGGTCTATGCCATCTTGC
ATAAGATTGACCTGACTCGCAACCGAGAAGAATGCCCAGTCCTCCTAGCCGCTCCAACTGGACGAGCAGCCAGACGGATG
AATGAATTGACAGGGCTGCCTTCCGCCACCATCCACCGCCACCTCGGTCTGGTAGAAGGACAGGAAGAATCCTACCGCGA
TGATTATTTGGATGCCGACTTTATCATCGTGGATGAGTTTTCTATGGTCGACACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATCTCCTCCCAAACCCAAGTTCTGATTGTCGGCGATGCGGAGCAATTACCATCTGTCAGTCCCGGTCAAGTCCTTGCT
GACCTCCTGAAAATTGACAAGCTACCCAGCATCACTCTAGAACGTATCTATCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGCCAGATTCGCCAAGGGGCTCTGCCTAGCGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCCCTGATTGAGCGCATTGTCGGCGCAGCTATCAAGTCAGGTATCCCTGCAAACGAAGTCCAA
ATCCTCGCTCCCATGTACCGTGGTGCTGCAGGTATTGACCAACTCAACACCATGACCCAGGCCCTGCTCAATCCACTGGA
AGAGGGAGAGTTAGAATTCCTCCATAACGAGCAAGCCTTCCGCCAAGGCGACCGGGTCATTCATCTAGTCAACGACGCCG
AAGCCAATGTCTTCAATGGCGACTTGGGCTACATCACCGACCTCCTGCCTGCCAAGTACACCGACTCCAAGCAGGACGAG
ATTACCATCAACTTCGACGGTAGCGAGGTCACCTATCCCCGTAACGAATGGTACAAAATCACTCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGCAGCGAGTTCCAGGTCGTTATTCTTCCTATCACTCGCACCAGCCACCGTATGCTCCAGCGCA
ATCTGGTCTACACCGCCATCACCCGCTCCAAGAGCAAGCTCATCCTCCTGGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGAACCGTCCGAAAAACCTATCTGGTCCCACGTTTCCAAGGGGAAATGGCAGAGCAGGATAGCAAGGAAGC
TTTAGCTGAAAAAGCCGAAAGCAAAACAGTGGCAACCACACAAACCCAGCCCCCTACTCAGCCAGACAGGAAAGAACAGG
TTAAAGTAGGCAAAGAAAACAATCTACAACTCTCCCTTCTTGATCAAGACCAGCCAGAAAAAACGAGTCCCCAACCCACA
GAATACATTTTGACTGTAGACAACCTACTAACCATCGACCCCATGATTGGCATAGAACAGGCAGATATTGAAGAATTTTT
TAACCTTAAGTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

• AAA domain (AAA_30) (332-529)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.579	91.566	0.381