Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   EL070_RS04430 Genome accession   NZ_LR134284
Coordinates   835732..835920 (+) Length   62 a.a.
NCBI ID   WP_032461628.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8232     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 830732..840920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL070_RS04395 (NCTC8232_00874) - 831307..831468 (+) 162 WP_002987333.1 hypothetical protein -
  EL070_RS04400 (NCTC8232_00875) - 831471..832088 (+) 618 WP_047235258.1 DUF1366 domain-containing protein -
  EL070_RS04405 (NCTC8232_00876) - 832098..832373 (+) 276 WP_002987582.1 hypothetical protein -
  EL070_RS04410 (NCTC8232_00877) - 832370..832597 (+) 228 WP_003058873.1 phage holin -
  EL070_RS04415 (NCTC8232_00879) - 832713..833918 (+) 1206 Protein_791 glucosaminidase domain-containing protein -
  EL070_RS04420 (NCTC8232_00880) - 833988..834422 (-) 435 WP_011017966.1 hypothetical protein -
  EL070_RS04425 (NCTC8232_00881) sda3 834694..835494 (-) 801 WP_011285611.1 streptodornase Sda3 -
  EL070_RS04430 (NCTC8232_00882) prx 835732..835920 (+) 189 WP_032461628.1 hypothetical protein Regulator
  EL070_RS04440 (NCTC8232_00884) - 836511..837125 (+) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  EL070_RS04445 (NCTC8232_00885) - 837252..838037 (-) 786 WP_002984433.1 hypothetical protein -
  EL070_RS04450 (NCTC8232_00886) - 838047..838745 (-) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  EL070_RS04455 (NCTC8232_00887) - 838745..839116 (-) 372 WP_002989617.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7312.35 Da        Isoelectric Point: 4.1813

>NTDB_id=1000037 EL070_RS04430 WP_032461628.1 835732..835920(+) (prx) [Streptococcus pyogenes strain NCTC8232]
MLTYDEFKQAIDNGYITADTVMIVRKNEQIFDYVLPHEKVKNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1000037 EL070_RS04430 WP_032461628.1 835732..835920(+) (prx) [Streptococcus pyogenes strain NCTC8232]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGAACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACCGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

88.71

100

0.887
  prx Streptococcus pyogenes MGAS8232

87.931

93.548

0.823
  prx Streptococcus pyogenes MGAS315

87.931

93.548

0.823
  prx Streptococcus pyogenes MGAS315

81.356

95.161

0.774
  prx Streptococcus pyogenes MGAS315

79.661

95.161

0.758
  prx Streptococcus pyogenes MGAS315

85.366

66.129

0.565
  prx Streptococcus pyogenes MGAS315

73.81

67.742

0.5

Multiple sequence alignment