NT genes of 'Avibacterium paragallinarum strain AP-2'


In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
Evidence:

Gene name Gene type Function Related MGE Organism Genome accession Locus tag Protein ID
insolico dprA Machinery gene DNA processing - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS00190 WP_264245186.1
insolico comE Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS00475 WP_264245254.1
insolico ssb Machinery gene DNA processing - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS00925 WP_017805689.1
insolico comN Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS01245 WP_264245432.1
insolico comE1/comEA Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS02155 WP_264245671.1
insolico pilA Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS02480 WP_035687024.1
insolico pilB Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS02485 WP_264245772.1
insolico pilC Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS02660 WP_264246751.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS03340 WP_264245981.1
insolico rec2 Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS04275 WP_404800581.1
insolico comM Machinery gene Involve in natural transformation - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS10050 WP_035686457.1
insolico ssb Machinery gene DNA processing - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS10775 WP_264244676.1
insolico recA Machinery gene Homologous recombination - Avibacterium paragallinarum strain AP-2 NZ_CP104917 N8E87_RS11895 WP_035687924.1

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    experimental Experimentally validated     insolico Bioinformatically predicted