Detailed information NTG0733488

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: N8E87_RS00190
• Genome accession: NZ_CP104917
• Coordinates: 41213..42313 (+)
• Length: 366 a.a.
• NCBI ID: WP_264245186.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain AP-2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 36213..47313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8E87_RS00165 (N8E87_00165)	mog	36930..37508 (+)	579	WP_264245177.1	molybdopterin adenylyltransferase	-
N8E87_RS00170 (N8E87_00170)	glnB	37561..37899 (+)	339	WP_264245179.1	nitrogen regulatory protein P-II	-
N8E87_RS00175 (N8E87_00175)	-	37902..38954 (+)	1053	WP_264245181.1	AI-2E family transporter	-
N8E87_RS00180 (N8E87_00180)	-	39323..40492 (+)	1170	WP_264245183.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
N8E87_RS00185 (N8E87_00185)	pilW	40526..41068 (+)	543	WP_017805302.1	type IV pilus biogenesis/stability protein PilW	-
N8E87_RS00190 (N8E87_00190)	dprA	41213..42313 (+)	1101	WP_264245186.1	DNA-processing protein DprA	Machinery gene
N8E87_RS00195 (N8E87_00195)	rsmD	42310..42918 (-)	609	WP_264245187.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
N8E87_RS00200 (N8E87_00200)	ftsY	43074..44492 (+)	1419	WP_264245189.1	signal recognition particle-docking protein FtsY	-
N8E87_RS00205 (N8E87_00205)	glpQ	45050..46144 (-)	1095	WP_264245191.1	glycerophosphodiester phosphodiesterase	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 40967.75 Da
• Isoelectric Point: 4.8599

>NTDB_id=733488 N8E87_RS00190 WP_264245186.1 41213..42313(+) (dprA) [Avibacterium paragallinarum strain AP-2]
MITNEMLLRLLQIPKFGANTIQKILGEISLTQLLDYDEYAFKQIGWSEKQIQRWFYPERKFIDPALQWAESAGNFLLNFT
DEDYPYLLKQIPSAPPILFLQGNLTALSQPQIAIVGSRYCSNYGEYWAKYFASELSLAGFTITSGLALGIDGFCHQAVVD
IQGQTLAVLGSGLDKVYPAKHRRLAEQIIEHNGTLISEFLPAQPPVAENFPRRNRIISGLSLGTLIIEATERSGSLITAR
YALEQNREIFALPGNIQNGFSEGCHKLIKQGATLVESVTDILENLPHYQYVTPNYTEQKSPSSANEQLTSEPPSYPELYA
QLSHIPISLDELSARLSLPIDVLLTQLLSLELQQLAVCENGLYRRS

Nucleotide

• Length: 1101 bp

>NTDB_id=733488 N8E87_RS00190 WP_264245186.1 41213..42313(+) (dprA) [Avibacterium paragallinarum strain AP-2]
ATGATAACCAATGAGATGTTACTCCGTTTGCTCCAAATTCCTAAATTTGGAGCAAATACTATTCAAAAAATACTGGGTGA
AATTAGTCTTACACAGCTTTTAGATTATGATGAATACGCGTTTAAACAGATTGGTTGGTCAGAAAAGCAAATTCAACGTT
GGTTTTACCCAGAACGAAAATTCATTGATCCTGCGTTACAATGGGCAGAAAGTGCGGGTAATTTTTTGCTTAATTTTACC
GATGAAGATTACCCTTATTTGCTGAAGCAAATTCCCTCCGCCCCGCCGATTTTATTTTTGCAAGGAAATTTGACCGCACT
TTCTCAACCACAAATTGCAATAGTAGGTAGCCGTTATTGCTCGAATTATGGGGAATATTGGGCGAAGTATTTTGCTTCAG
AGTTGAGTCTTGCGGGCTTTACGATAACCAGTGGGCTAGCTTTAGGGATCGACGGATTTTGTCATCAAGCAGTGGTGGAT
ATTCAAGGGCAAACGCTGGCGGTGCTTGGAAGTGGGTTGGATAAGGTGTATCCTGCAAAACATCGCCGTTTGGCTGAGCA
AATTATTGAGCATAACGGCACATTGATTTCCGAATTTCTCCCCGCACAACCGCCCGTCGCGGAGAATTTCCCACGCCGAA
ACCGTATTATTAGCGGGCTTTCGCTTGGCACGCTAATTATTGAAGCCACCGAGCGGAGCGGTTCACTCATTACGGCTCGT
TATGCGTTGGAGCAAAACCGTGAGATCTTTGCCTTGCCGGGCAATATTCAAAATGGCTTTAGTGAGGGCTGTCATAAGCT
CATCAAACAAGGGGCGACATTAGTGGAGAGCGTGACGGATATTTTAGAAAATCTCCCACATTATCAGTATGTTACACCGA
ATTATACCGAACAGAAATCGCCATCGTCGGCGAACGAGCAGCTAACTTCAGAGCCACCAAGTTATCCCGAACTTTACGCT
CAATTAAGCCACATTCCCATTAGCCTTGATGAACTTTCAGCCCGTTTGTCATTGCCGATTGATGTCTTATTAACCCAATT
ATTAAGTTTAGAATTGCAACAATTAGCGGTTTGTGAAAATGGGCTGTATCGGCGAAGTTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (312-357)

• DNA recombination-mediator protein A (DNA_processg_A) (71-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	62.703	100	0.634
dprA	Glaesserella parasuis strain SC1401	56.897	95.082	0.541
dprA	Vibrio cholerae strain A1552	43.443	100	0.434
dprA	Vibrio campbellii strain DS40M4	42.061	98.087	0.413
dprA	Legionella pneumophila strain ERS1305867	40.71	100	0.407
dprA	Acinetobacter baumannii strain A118	43.421	83.06	0.361