oriTDB
  • Home
  • Browse
  • Statistics
  • Tools
    • oriTfinder2
    • BLAST Search
    • HMMER Search
  • Download
  • References
  • Help

Browse

  • oriT 15
  • Relaxase 14
  • Auxiliary protein 0
  • Relaxosome 0
  • T4CP 6
  • T4SS 6
Taxonomy filter:     Level: genus    Name: Lacticaseibacillus    

Source:   

Evidence:

oriT ID oriT name Species Sequence
completeness  
nic site   Accessory function
of plasmid
100148 in_silico oriT_pSMA23 Lacticaseibacillus casei core TATTGG|GCTAT
103939 in_silico oriT_pTXW Lacticaseibacillus paracasei - GTGTGTTATA
104369 in_silico oriT_pLrVSI43_1 Lacticaseibacillus rhamnosus - _ Anti-CRISPR
104629 in_silico oriT_pLPN-3 Lacticaseibacillus paracasei - _ Anti-CRISPR
105923 in_silico oriT_CLK 101|unnamed1 Lacticaseibacillus rhamnosus - _ Anti-CRISPR
106476 in_silico oriT_pWX8 Lacticaseibacillus paracasei - _
106735 in_silico oriT_SCB0563|unnamed1 Lacticaseibacillus paracasei - _ Anti-CRISPR
111186 in_silico oriT_GR-1|p1 Lacticaseibacillus rhamnosus - _ Anti-CRISPR
111276 in_silico oriT_L1|p6 Lacticaseibacillus paracasei - _ Anti-CRISPR
114522 in_silico oriT_pRCEID2.9 Lacticaseibacillus casei - _
116692 in_silico oriT_362.5013889|1 Lacticaseibacillus paracasei - _ Anti-CRISPR
116774 in_silico oriT_pLP5403 Lacticaseibacillus paracasei - _
116775 in_silico oriT_pWCZ Lacticaseibacillus paracasei - _
116777 in_silico oriT_pLp02-2 Lacticaseibacillus paracasei - _
121174 in_silico oriT_plca36 Lacticaseibacillus paracasei - _ Anti-CRISPR

View allView Less
    experimental Experimentally validated     insolico Bioinformatically predicted

    Links
    Contact
    Microbial Bioinformatics Group in MML, SJTU

    Current version: 2.0
    Since: May 2017
    Recently update: Jun. 2024