TA loci of Salmonella enterica subsp. enterica serovar Dublin strain RM099

Number of TA loci: experimental0; insolico19

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA270739 - Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS00940 (tacT) PQP84_RS00935 (tacA) tacAT/DUF1778(antitoxin)
in_silico TA270740 Prophage Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS01425 (doc) PQP84_RS01420 (phd) phd-doc/Doc-RelB
in_silico TA270741 - Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS01630 (yafQ) PQP84_RS01625 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA270743 GI Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS04040 (vapC) PQP84_RS04035 (vapB) vapBC/VapC-VagC
in_silico TA270744 IS/Tn Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS04730 (TacT3) PQP84_RS04735 (TacA3) tacAT/DUF1778(antitoxin)
in_silico TA270749 - Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS17670 (Hha) PQP84_RS17665 (TomB) Hha-TomB/-
in_silico TA270752 - Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS20440 (shpA) PQP84_RS20435 (shpB) shpAB/BrnT-BrnA
in_silico TA270753 IScluster/Tn Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS20675 (ccdB) PQP84_RS20680 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA270754 - Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS20880 (relE) PQP84_RS20885 (relB) relBE/ParE-RelB
in_silico TA270755 - Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS21455 (TacT2) PQP84_RS21460 (TacA2) tacAT/DUF1778(antitoxin)
in_silico TA270756 - Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS22795 (higB) PQP84_RS22790 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA270757 - Salmonella enterica subsp. enterica serovar Dublin strain RM099 (chromosome) NZ_CP117354 PQP84_RS22805 (higB) PQP84_RS22810 (higA) higBA (relBE)/HigB-HigA
in_silico TA270758 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM099 (plasmid pRM099_1) NZ_CP117355 PQP84_RS23845 (higB) PQP84_RS23840 (higA) higBA (relBE)/COG4683-HTH_37
in_silico TA270759 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM099 (plasmid pRM099_2) NZ_CP117356 PQP84_RS24335 (vagD) PQP84_RS24340 (vagC) vagCD/VapC-VagC
in_silico TA270760 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM099 (plasmid pRM099_2) NZ_CP117356 PQP84_RS24350 (ccdB) PQP84_RS24345 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA270761 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM099 (plasmid pRM099_2) NZ_CP117356 PQP84_RS24535 (relE) PQP84_RS24530 (relB) relBE/ParE-DnaT
experimentalExperimentally validated     insolicoBioinformatically predicted