NZ_LT906474640900..652574

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_LT906474        Location: 640900..652574         Organism: Escherichia coli strain NCTC122       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CKV98_RS03240 () 635901..636335 - 435 WP_000948824.1 PTS sugar transporter subunit IIA -
CKV98_RS03245 () 636353..637231 - 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
CKV98_RS03250 () 637221..638000 - 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
CKV98_RS03255 () 638011..638484 - 474 WP_081508768.1 PTS N-acetylgalactosamine transporter subunit IIB -
CKV98_RS03260 () 638507..639787 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
CKV98_RS03270 () 640036..640845 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
CKV98_RS03275 () 640900..641364 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
CKV98_RS03280 () 641364..641699 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
CKV98_RS03285 () 641848..643419 - 1572 WP_001273753.1 galactarate dehydratase -
CKV98_RS03290 () 643794..645128 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
CKV98_RS03295 () 645144..645914 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
CKV98_RS03300 () 645944..646834 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
CKV98_RS03305 () 646931..648076 + 1146 WP_001300387.1 glycerate 2-kinase -
CKV98_RS03315 () 649099..650286 - 1188 Protein_603 YhaC family protein -
CKV98_RS03320 () 650308..650847 - 540 WP_069905076.1 hypothetical protein -
CKV98_RS23875 () 651103..651321 - 219 WP_001301311.1 transcriptional activator TdcR -
CKV98_RS03330 () 651636..652574 + 939 WP_081508769.1 transcriptional regulator TdcA -
CKV98_RS03335 () 652673..653662 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
CKV98_RS03340 () 653684..655015 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
CKV98_RS03345 () 655041..656249 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.004
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001