NZ_LN8324043264366..3274313

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_LN832404        Location: 3264366..3274313         Organism: Escherichia coli K-12 substr. AG100       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EK12AG100_RS16190 () 3260198..3261529 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
EK12AG100_RS16195 () 3261551..3262540 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
EK12AG100_RS16200 () 3262639..3263577 - 939 WP_000104211.1 transcriptional regulator TdcA -
EK12AG100_RS26035 () 3263892..3264110 + 219 WP_001301311.1 transcriptional activator TdcR -
EK12AG100_RS16210 () 3264366..3264905 + 540 WP_000675733.1 hypothetical protein -
EK12AG100_RS16215 () 3264927..3266114 + 1188 WP_000484600.1 YhaC family protein -
EK12AG100_RS16220 () 3267137..3268282 - 1146 WP_001300387.1 glycerate 2-kinase -
EK12AG100_RS16225 () 3268379..3269269 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
EK12AG100_RS16230 () 3269299..3270069 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
EK12AG100_RS16235 () 3270085..3271419 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
EK12AG100_RS16240 () 3271794..3273365 + 1572 WP_001273747.1 galactarate dehydratase -
EK12AG100_RS16245 () 3273514..3273849 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
EK12AG100_RS16250 () 3273849..3274313 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
EK12AG100_RS16255 () 3274368..3275177 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
EK12AG100_RS16260 () 3275426..3276706 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
EK12AG100_RS16265 () 3276729..3277202 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
EK12AG100_RS16270 () 3277213..3277584 + 372 Protein_3101 PTS sugar transporter subunit IIC -
EK12AG100_RS16275 () 3277580..3278137 + 558 Protein_3102 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004