NZ_LM9938123220234..3230181

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_LM993812        Location: 3220234..3230181         Organism: Escherichia coli strain K-12 substr. HMS174       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ECHMS174_RS15905 () 3216066..3217397 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
ECHMS174_RS15910 () 3217419..3218408 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
ECHMS174_RS15915 () 3218507..3219445 - 939 WP_000104211.1 transcriptional regulator TdcA -
ECHMS174_RS25785 () 3219760..3219978 + 219 WP_001301311.1 transcriptional activator TdcR -
ECHMS174_RS15925 () 3220234..3220773 + 540 WP_000675733.1 hypothetical protein -
ECHMS174_RS15930 () 3220795..3221982 + 1188 WP_000484600.1 YhaC family protein -
ECHMS174_RS15935 () 3223005..3224150 - 1146 WP_001300387.1 glycerate 2-kinase -
ECHMS174_RS15940 () 3224247..3225137 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
ECHMS174_RS15945 () 3225167..3225937 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
ECHMS174_RS15950 () 3225953..3227287 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
ECHMS174_RS15955 () 3227662..3229233 + 1572 WP_001273753.1 galactarate dehydratase -
ECHMS174_RS15960 () 3229382..3229717 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
ECHMS174_RS15965 () 3229717..3230181 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
ECHMS174_RS15970 () 3230236..3231045 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
ECHMS174_RS15975 () 3231294..3232574 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
ECHMS174_RS15980 () 3232597..3233070 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
ECHMS174_RS15985 () 3233081..3233452 + 372 Protein_3047 PTS sugar transporter subunit IIC -
ECHMS174_RS15990 () 3233448..3234005 + 558 Protein_3048 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004