NZ_CP122655646187..657860

MGE detailed information

MGE type: Genomic_island        MGE length: 11674 bp
Accession: NZ_CP122655        Location: 646187..657860         Organism: Escherichia coli strain ETEC4074       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QDW60_RS03115 (641188) 641188..641622 - 435 WP_000948824.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -
QDW60_RS03120 (641640) 641640..642518 - 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
QDW60_RS03125 (642508) 642508..643287 - 780 WP_000406209.1 PTS N-acetylgalactosamine transporter subunit IIC -
QDW60_RS03130 (643298) 643298..643771 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
QDW60_RS03135 (643794) 643794..645074 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
QDW60_RS03140 (645323) 645323..646132 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
QDW60_RS03145 (646187) 646187..646651 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
QDW60_RS03150 (646651) 646651..646986 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
QDW60_RS03155 (647135) 647135..648706 - 1572 WP_001273753.1 galactarate dehydratase -
QDW60_RS03160 (649081) 649081..650415 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
QDW60_RS03165 (650431) 650431..651201 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
QDW60_RS03170 (651231) 651231..652121 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
QDW60_RS03175 (652218) 652218..653363 + 1146 WP_001300387.1 glycerate 2-kinase -
QDW60_RS03185 (654385) 654385..655572 - 1188 WP_032083795.1 YhaC family protein -
QDW60_RS03190 (655594) 655594..656133 - 540 WP_000675733.1 protein YhaB -
QDW60_RS03195 (656389) 656389..656607 - 219 WP_001301311.1 transcriptional activator TdcR -
QDW60_RS03200 (656922) 656922..657860 + 939 WP_000104211.1 transcriptional regulator TdcA -
QDW60_RS03205 (657959) 657959..658948 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
QDW60_RS03210 (658970) 658970..660301 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
QDW60_RS03215 (660327) 660327..661535 + 1209 WP_040091686.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0