NZ_CP122634622498..634059

MGE detailed information

MGE type: Genomic_island        MGE length: 11562 bp
Accession: NZ_CP122634        Location: 622498..634059         Organism: Escherichia coli strain ETEC4085       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QDW62_RS03025 (617499) 617499..617933 - 435 WP_000948814.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -
QDW62_RS03030 (617951) 617951..618829 - 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
QDW62_RS03035 (618819) 618819..619598 - 780 WP_000406214.1 PTS N-acetylgalactosamine transporter subunit IIC -
QDW62_RS03040 (619609) 619609..620082 - 474 WP_001295547.1 PTS N-acetylgalactosamine transporter subunit IIB -
QDW62_RS03045 (620105) 620105..621385 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
QDW62_RS03050 (621634) 621634..622443 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
QDW62_RS03055 (622498) 622498..622962 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
QDW62_RS03060 (622962) 622962..623297 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
QDW62_RS03065 (623446) 623446..625017 - 1572 WP_001273754.1 galactarate dehydratase -
QDW62_RS03070 (625392) 625392..626726 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
QDW62_RS03075 (626742) 626742..627512 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
QDW62_RS03080 (627542) 627542..628432 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
QDW62_RS03085 (628529) 628529..629674 + 1146 WP_001297158.1 glycerate 2-kinase -
QDW62_RS03095 (630583) 630583..631771 - 1189 Protein_606 YhaC family protein -
QDW62_RS03100 (631793) 631793..632332 - 540 WP_000675734.1 protein YhaB -
QDW62_RS03105 (632588) 632588..632806 - 219 WP_169001294.1 transcriptional activator TdcR -
QDW62_RS03110 (633121) 633121..634059 + 939 WP_000104211.1 transcriptional regulator TdcA -
QDW62_RS03115 (634158) 634158..635147 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
QDW62_RS03120 (635169) 635169..636500 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
QDW62_RS03125 (636526) 636526..637734 + 1209 WP_001001837.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.009
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.006
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.004
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.006
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.006
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.006
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.006
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.006
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.006
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001