NZ_CP116035629677..641351

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP116035        Location: 629677..641351         Organism: Escherichia coli strain FAH       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PGH49_RS03020 (624678) 624678..625112 - 435 WP_000948824.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -
PGH49_RS03025 (625130) 625130..626008 - 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
PGH49_RS03030 (625998) 625998..626777 - 780 WP_000406209.1 PTS N-acetylgalactosamine transporter subunit IIC -
PGH49_RS03035 (626788) 626788..627261 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
PGH49_RS03040 (627284) 627284..628564 - 1281 WP_000681933.1 tagatose-bisphosphate aldolase subunit KbaZ -
PGH49_RS03045 (628813) 628813..629622 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
PGH49_RS03050 (629677) 629677..630141 - 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
PGH49_RS03055 (630141) 630141..630476 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
PGH49_RS03060 (630625) 630625..632196 - 1572 WP_001273752.1 galactarate dehydratase -
PGH49_RS03065 (632571) 632571..633905 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
PGH49_RS03070 (633921) 633921..634691 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
PGH49_RS03075 (634721) 634721..635611 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
PGH49_RS03080 (635708) 635708..636853 + 1146 WP_001300387.1 glycerate 2-kinase -
PGH49_RS03090 (637876) 637876..639063 - 1188 WP_001774050.1 YhaC family protein -
PGH49_RS03095 (639085) 639085..639624 - 540 WP_000675733.1 protein YhaB -
PGH49_RS03100 (639880) 639880..640098 - 219 WP_001301311.1 transcriptional activator TdcR -
PGH49_RS03105 (640413) 640413..641351 + 939 WP_000104211.1 transcriptional regulator TdcA -
PGH49_RS03110 (641450) 641450..642439 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
PGH49_RS03115 (642461) 642461..643792 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
PGH49_RS03120 (643818) 643818..645026 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001