NZ_CP1148942630796..2640743

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP114894        Location: 2630796..2640743         Organism: Escherichia coli strain CM19       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
O6X69_RS12920 (2626628) 2626628..2627959 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
O6X69_RS12925 (2627981) 2627981..2628970 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
O6X69_RS12930 (2629069) 2629069..2630007 - 939 WP_000104211.1 transcriptional regulator TdcA -
O6X69_RS12935 (2630322) 2630322..2630540 + 219 WP_001301311.1 transcriptional activator TdcR -
O6X69_RS12940 (2630796) 2630796..2631335 + 540 WP_000675733.1 protein YhaB -
O6X69_RS12945 (2631357) 2631357..2632544 + 1188 WP_000484600.1 YhaC family protein -
O6X69_RS12955 (2633567) 2633567..2634712 - 1146 WP_001300387.1 glycerate 2-kinase -
O6X69_RS12960 (2634809) 2634809..2635699 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
O6X69_RS12965 (2635729) 2635729..2636499 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
O6X69_RS12970 (2636515) 2636515..2637849 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
O6X69_RS12975 (2638224) 2638224..2639795 + 1572 WP_001273753.1 galactarate dehydratase -
O6X69_RS12980 (2639944) 2639944..2640279 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
O6X69_RS12985 (2640279) 2640279..2640743 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
O6X69_RS12990 (2640798) 2640798..2641607 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
O6X69_RS12995 (2641856) 2641856..2643136 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
O6X69_RS13000 (2643159) 2643159..2643632 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
O6X69_RS13005 (2643643) 2643643..2644014 + 372 Protein_2534 PTS sugar transporter subunit IIC -
O6X69_RS13010 (2644010) 2644010..2644567 + 558 Protein_2535 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004