MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP114891 Location: 79257..90931 Organism: Escherichia coli strain CM2 Replicon: chromosome
Accession: NZ_CP114891 Location: 79257..90931 Organism: Escherichia coli strain CM2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6Q44_RS00400 (75433) | 75433..75990 | - | 558 | Protein_77 | amidohydrolase family protein | - |
| O6Q44_RS00405 (75986) | 75986..76357 | - | 372 | Protein_78 | PTS sugar transporter subunit IIC | - |
| O6Q44_RS00410 (76368) | 76368..76841 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| O6Q44_RS00415 (76864) | 76864..78144 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| O6Q44_RS00420 (78393) | 78393..79202 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| O6Q44_RS00425 (79257) | 79257..79721 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| O6Q44_RS00430 (79721) | 79721..80056 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| O6Q44_RS00435 (80205) | 80205..81776 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| O6Q44_RS00440 (82151) | 82151..83485 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| O6Q44_RS00445 (83501) | 83501..84271 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| O6Q44_RS00450 (84301) | 84301..85191 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| O6Q44_RS00455 (85288) | 85288..86433 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| O6Q44_RS00465 (87456) | 87456..88643 | - | 1188 | WP_000484600.1 | YhaC family protein | - |
| O6Q44_RS00470 (88665) | 88665..89204 | - | 540 | WP_000675733.1 | protein YhaB | - |
| O6Q44_RS00475 (89460) | 89460..89678 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| O6Q44_RS00480 (89993) | 89993..90931 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| O6Q44_RS00485 (91030) | 91030..92019 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| O6Q44_RS00490 (92041) | 92041..93372 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| O6Q44_RS00495 (93398) | 93398..94606 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20042 | CP009789 | 3247092..3263092 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.003 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.004 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.004 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.001 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0 |