NZ_CP110859605769..617443

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP110859        Location: 605769..617443         Organism: Escherichia coli strain TSW4881-W1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OQ464_RS02920 (601945) 601945..602502 - 558 Protein_572 amidohydrolase family protein -
OQ464_RS02925 (602498) 602498..602869 - 372 Protein_573 PTS sugar transporter subunit IIC -
OQ464_RS02930 (602880) 602880..603353 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
OQ464_RS02935 (603376) 603376..604656 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
OQ464_RS02940 (604905) 604905..605714 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
OQ464_RS02945 (605769) 605769..606233 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
OQ464_RS02950 (606233) 606233..606568 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
OQ464_RS02955 (606717) 606717..608288 - 1572 WP_001273753.1 galactarate dehydratase -
OQ464_RS02960 (608663) 608663..609997 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
OQ464_RS02965 (610013) 610013..610783 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
OQ464_RS02970 (610813) 610813..611703 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
OQ464_RS02975 (611800) 611800..612945 + 1146 WP_001300387.1 glycerate 2-kinase -
OQ464_RS02985 (613968) 613968..615155 - 1188 WP_000484600.1 YhaC family protein -
OQ464_RS02990 (615177) 615177..615716 - 540 WP_000675733.1 protein YhaB -
OQ464_RS02995 (615972) 615972..616190 - 219 WP_001301311.1 transcriptional activator TdcR -
OQ464_RS03000 (616505) 616505..617443 + 939 WP_000104211.1 transcriptional regulator TdcA -
OQ464_RS03005 (617542) 617542..618531 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
OQ464_RS03010 (618553) 618553..619884 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
OQ464_RS03015 (619910) 619910..621118 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.004
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.004
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.004
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.004
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.004
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.004
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.004
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0