NZ_CP1100173364966..3374913

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP110017        Location: 3364966..3374913         Organism: Escherichia coli strain HE_50       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OLR76_RS16550 (3360798) 3360798..3362129 - 1332 WP_282983241.1 threonine/serine transporter TdcC -
OLR76_RS16555 (3362151) 3362151..3363140 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
OLR76_RS16560 (3363239) 3363239..3364177 - 939 WP_000104211.1 transcriptional regulator TdcA -
OLR76_RS16565 (3364492) 3364492..3364710 + 219 WP_001301311.1 transcriptional activator TdcR -
OLR76_RS16570 (3364966) 3364966..3365505 + 540 WP_000675733.1 protein YhaB -
OLR76_RS16575 (3365527) 3365527..3366714 + 1188 WP_000484600.1 YhaC family protein -
OLR76_RS16585 (3367737) 3367737..3368882 - 1146 WP_001300387.1 glycerate 2-kinase -
OLR76_RS16590 (3368979) 3368979..3369869 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
OLR76_RS16595 (3369899) 3369899..3370669 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
OLR76_RS16600 (3370685) 3370685..3372019 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
OLR76_RS16605 (3372394) 3372394..3373965 + 1572 WP_001273753.1 galactarate dehydratase -
OLR76_RS16610 (3374114) 3374114..3374449 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
OLR76_RS16615 (3374449) 3374449..3374913 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
OLR76_RS16620 (3374968) 3374968..3375777 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
OLR76_RS16625 (3376026) 3376026..3377306 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
OLR76_RS16630 (3377329) 3377329..3377802 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
OLR76_RS16635 (3377813) 3377813..3378184 + 372 Protein_3250 PTS sugar transporter subunit IIC -
OLR76_RS16640 (3378180) 3378180..3378737 + 558 Protein_3251 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004