NZ_CP1045094295296..4305243

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP104509        Location: 4295296..4305243         Organism: Escherichia coli strain E2       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N5O74_RS21725 (4291128) 4291128..4292459 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
N5O74_RS21730 (4292481) 4292481..4293470 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
N5O74_RS21735 (4293569) 4293569..4294507 - 939 WP_000104211.1 transcriptional regulator TdcA -
N5O74_RS21740 (4294822) 4294822..4295040 + 219 WP_001301311.1 transcriptional activator TdcR -
N5O74_RS21745 (4295296) 4295296..4295835 + 540 WP_000675733.1 protein YhaB -
N5O74_RS21750 (4295857) 4295857..4297044 + 1188 WP_000484598.1 YhaC family protein -
N5O74_RS21760 (4298067) 4298067..4299212 - 1146 WP_001300387.1 glycerate 2-kinase -
N5O74_RS21765 (4299309) 4299309..4300199 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
N5O74_RS21770 (4300229) 4300229..4300999 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
N5O74_RS21775 (4301015) 4301015..4302349 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
N5O74_RS21780 (4302724) 4302724..4304295 + 1572 WP_001273753.1 galactarate dehydratase -
N5O74_RS21785 (4304444) 4304444..4304779 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
N5O74_RS21790 (4304779) 4304779..4305243 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
N5O74_RS21795 (4305298) 4305298..4306107 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
N5O74_RS21800 (4306356) 4306356..4307636 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
N5O74_RS21805 (4307659) 4307659..4308132 + 474 WP_134235305.1 PTS N-acetylgalactosamine transporter subunit IIB -
N5O74_RS21810 (4308143) 4308143..4308922 + 780 WP_000406209.1 PTS N-acetylgalactosamine transporter subunit IIC -
N5O74_RS21815 (4308912) 4308912..4309790 + 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
N5O74_RS21820 (4309808) 4309808..4310242 + 435 WP_000948824.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004