NZ_CP104384604511..616185

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP104384        Location: 604511..616185         Organism: Escherichia coli strain JNQH498       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KIG00_RS02905 (599512) 599512..599946 - 435 WP_000948824.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -
KIG00_RS02910 (599964) 599964..600842 - 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
KIG00_RS02915 (600832) 600832..601611 - 780 WP_000406209.1 PTS N-acetylgalactosamine transporter subunit IIC -
KIG00_RS02920 (601622) 601622..602095 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
KIG00_RS02925 (602118) 602118..603398 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
KIG00_RS02930 (603647) 603647..604456 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
KIG00_RS02935 (604511) 604511..604975 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
KIG00_RS02940 (604975) 604975..605310 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
KIG00_RS02945 (605459) 605459..607030 - 1572 WP_001273753.1 galactarate dehydratase -
KIG00_RS02950 (607405) 607405..608739 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
KIG00_RS02955 (608755) 608755..609525 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
KIG00_RS02960 (609555) 609555..610445 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
KIG00_RS02965 (610542) 610542..611687 + 1146 WP_001300387.1 glycerate 2-kinase -
KIG00_RS02975 (612710) 612710..613897 - 1188 WP_000484598.1 YhaC family protein -
KIG00_RS02980 (613919) 613919..614458 - 540 WP_000675733.1 protein YhaB -
KIG00_RS02985 (614714) 614714..614932 - 219 WP_001301311.1 transcriptional activator TdcR -
KIG00_RS02990 (615247) 615247..616185 + 939 WP_000104211.1 transcriptional regulator TdcA -
KIG00_RS02995 (616284) 616284..617273 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
KIG00_RS03000 (617295) 617295..618626 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
KIG00_RS03005 (618652) 618652..619860 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.004
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.004
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.004
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.004
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.004
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0