MGE detailed information
MGE type: Genomic_island MGE length: 9900 bp
Accession: NZ_CP103972 Location: 2093119..2103018 Organism: Escherichia coli strain DLI.5a Replicon: chromosome
Accession: NZ_CP103972 Location: 2093119..2103018 Organism: Escherichia coli strain DLI.5a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZD79_RS10205 (2088904) | 2088904..2090235 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| NZD79_RS10210 (2090257) | 2090257..2091246 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| NZD79_RS10215 (2091345) | 2091345..2092283 | - | 939 | WP_097342106.1 | transcriptional regulator TdcA | - |
| NZD79_RS10220 (2092598) | 2092598..2092816 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| NZD79_RS10225 (2093072) | 2093072..2093610 | + | 539 | Protein_2006 | hypothetical protein | - |
| NZD79_RS10230 (2093632) | 2093632..2094819 | + | 1188 | WP_000484598.1 | YhaC family protein | - |
| NZD79_RS10240 (2095842) | 2095842..2096987 | - | 1146 | WP_259568216.1 | glycerate 2-kinase | - |
| NZD79_RS10245 (2097084) | 2097084..2097974 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| NZD79_RS10250 (2098004) | 2098004..2098774 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| NZD79_RS10255 (2098790) | 2098790..2100124 | - | 1335 | WP_259568217.1 | galactarate/glucarate/glycerate transporter GarP | - |
| NZD79_RS10260 (2100499) | 2100499..2102070 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| NZD79_RS10265 (2102219) | 2102219..2102554 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| NZD79_RS10270 (2102554) | 2102554..2103018 | + | 465 | WP_000347275.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| NZD79_RS10275 (2103073) | 2103073..2103882 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| NZD79_RS10280 (2104131) | 2104131..2105411 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| NZD79_RS10285 (2105434) | 2105434..2105907 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| NZD79_RS10290 (2105918) | 2105918..2106697 | + | 780 | WP_000406209.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| NZD79_RS10295 (2106743) | 2106743..2107042 | + | 300 | Protein_2019 | amidohydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.005 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.001 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.001 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.005 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.005 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.005 |