NZ_CP103515603634..615308

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP103515        Location: 603634..615308         Organism: Escherichia coli strain 5444       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M5S96_RS02920 (598635) 598635..599069 - 435 WP_000948824.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -
M5S96_RS02925 (599087) 599087..599965 - 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
M5S96_RS02930 (599955) 599955..600734 - 780 WP_000406209.1 PTS N-acetylgalactosamine transporter subunit IIC -
M5S96_RS02935 (600745) 600745..601218 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
M5S96_RS02940 (601241) 601241..602521 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
M5S96_RS02945 (602770) 602770..603579 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
M5S96_RS02950 (603634) 603634..604098 - 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
M5S96_RS02955 (604098) 604098..604433 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
M5S96_RS02960 (604582) 604582..606153 - 1572 WP_001273752.1 galactarate dehydratase -
M5S96_RS02965 (606528) 606528..607862 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
M5S96_RS02970 (607878) 607878..608648 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
M5S96_RS02975 (608678) 608678..609568 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
M5S96_RS02980 (609665) 609665..610810 + 1146 WP_001300387.1 glycerate 2-kinase -
M5S96_RS02990 (611833) 611833..613020 - 1188 WP_046464216.1 YhaC family protein -
M5S96_RS02995 (613042) 613042..613581 - 540 WP_000675733.1 protein YhaB -
M5S96_RS03000 (613837) 613837..614055 - 219 WP_001301311.1 transcriptional activator TdcR -
M5S96_RS03005 (614370) 614370..615308 + 939 WP_000104211.1 transcriptional regulator TdcA -
M5S96_RS03010 (615407) 615407..616396 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
M5S96_RS03015 (616418) 616418..617749 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
M5S96_RS03020 (617775) 617775..618983 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001