NZ_CP1023793137622..3147569

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP102379        Location: 3137622..3147569         Organism: Escherichia coli strain BM28 lysU       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NR350_RS15240 (3133454) 3133454..3134785 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
NR350_RS15245 (3134807) 3134807..3135796 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
NR350_RS15250 (3135895) 3135895..3136833 - 939 WP_000104211.1 transcriptional regulator TdcA -
NR350_RS15255 (3137148) 3137148..3137366 + 219 WP_001301311.1 transcriptional activator TdcR -
NR350_RS15260 (3137622) 3137622..3138161 + 540 WP_000675733.1 protein YhaB -
NR350_RS15265 (3138183) 3138183..3139370 + 1188 WP_000484600.1 YhaC family protein -
NR350_RS15275 (3140393) 3140393..3141538 - 1146 WP_001300387.1 glycerate 2-kinase -
NR350_RS15280 (3141635) 3141635..3142525 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
NR350_RS15285 (3142555) 3142555..3143325 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
NR350_RS15290 (3143341) 3143341..3144675 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
NR350_RS15295 (3145050) 3145050..3146621 + 1572 WP_001273753.1 galactarate dehydratase -
NR350_RS15300 (3146770) 3146770..3147105 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
NR350_RS15305 (3147105) 3147105..3147569 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
NR350_RS15310 (3147624) 3147624..3148433 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
NR350_RS15315 (3148682) 3148682..3149962 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
NR350_RS15320 (3149985) 3149985..3150458 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
NR350_RS15325 (3150469) 3150469..3150840 + 372 Protein_2990 PTS sugar transporter subunit IIC -
NR350_RS15330 (3150836) 3150836..3151393 + 558 Protein_2991 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004