NZ_CP086490611445..623119

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP086490        Location: 611445..623119         Organism: Escherichia coli strain Ec-050-T5-ESBL       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LNN51_RS02945 (606446) 606446..606880 - 435 WP_000948824.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -
LNN51_RS02950 (606898) 606898..607776 - 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
LNN51_RS02955 (607766) 607766..608545 - 780 WP_000406209.1 PTS N-acetylgalactosamine transporter subunit IIC -
LNN51_RS02960 (608556) 608556..609029 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
LNN51_RS02965 (609052) 609052..610332 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
LNN51_RS02970 (610581) 610581..611390 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
LNN51_RS02975 (611445) 611445..611909 - 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
LNN51_RS02980 (611909) 611909..612244 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
LNN51_RS02985 (612393) 612393..613964 - 1572 WP_001273752.1 galactarate dehydratase -
LNN51_RS02990 (614339) 614339..615673 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
LNN51_RS02995 (615689) 615689..616459 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
LNN51_RS03000 (616489) 616489..617379 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
LNN51_RS03005 (617476) 617476..618621 + 1146 WP_001300387.1 glycerate 2-kinase -
LNN51_RS03015 (619644) 619644..620831 - 1188 WP_000484594.1 YhaC family protein -
LNN51_RS03020 (620853) 620853..621392 - 540 WP_000675733.1 protein YhaB -
LNN51_RS03025 (621648) 621648..621866 - 219 WP_001301311.1 transcriptional activator TdcR -
LNN51_RS03030 (622181) 622181..623119 + 939 WP_000104211.1 transcriptional regulator TdcA -
LNN51_RS03035 (623218) 623218..624207 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
LNN51_RS03040 (624229) 624229..625560 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
LNN51_RS03045 (625586) 625586..626794 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001