NZ_CP0836102089430..2101104

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP083610        Location: 2089430..2101104         Organism: Escherichia coli strain EC2648-Vir1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LAJ48_RS10075 (2085606) 2085606..2086163 - 558 Protein_1962 amidohydrolase family protein -
LAJ48_RS10080 (2086159) 2086159..2086530 - 372 Protein_1963 PTS sugar transporter subunit IIC -
LAJ48_RS10085 (2086541) 2086541..2087014 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
LAJ48_RS10090 (2087037) 2087037..2088317 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
LAJ48_RS10095 (2088566) 2088566..2089375 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
LAJ48_RS10100 (2089430) 2089430..2089894 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
LAJ48_RS10105 (2089894) 2089894..2090229 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
LAJ48_RS10110 (2090378) 2090378..2091949 - 1572 WP_001273753.1 galactarate dehydratase -
LAJ48_RS10115 (2092324) 2092324..2093658 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
LAJ48_RS10120 (2093674) 2093674..2094444 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
LAJ48_RS10125 (2094474) 2094474..2095364 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
LAJ48_RS10130 (2095461) 2095461..2096606 + 1146 WP_001300387.1 glycerate 2-kinase -
LAJ48_RS10140 (2097629) 2097629..2098816 - 1188 WP_000484600.1 YhaC family protein -
LAJ48_RS10145 (2098838) 2098838..2099377 - 540 WP_000675733.1 protein YhaB -
LAJ48_RS10150 (2099633) 2099633..2099851 - 219 WP_001301311.1 transcriptional activator TdcR -
LAJ48_RS10155 (2100166) 2100166..2101104 + 939 WP_000104211.1 transcriptional regulator TdcA -
LAJ48_RS10160 (2101203) 2101203..2102192 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
LAJ48_RS10165 (2102214) 2102214..2103545 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
LAJ48_RS10170 (2103571) 2103571..2104779 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.004
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.004
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.004
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.004
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.004
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.004
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.004
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0