NZ_CP0834103267715..3277662

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP083410        Location: 3267715..3277662         Organism: Escherichia coli strain RP437       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LAJ62_RS15915 (3263547) 3263547..3264878 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
LAJ62_RS15920 (3264900) 3264900..3265889 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
LAJ62_RS15925 (3265988) 3265988..3266926 - 939 WP_000104211.1 transcriptional regulator TdcA -
LAJ62_RS15930 (3267241) 3267241..3267459 + 219 WP_001301311.1 transcriptional activator TdcR -
LAJ62_RS15935 (3267715) 3267715..3268254 + 540 WP_000675733.1 protein YhaB -
LAJ62_RS15940 (3268276) 3268276..3269463 + 1188 WP_000484600.1 YhaC family protein -
LAJ62_RS15950 (3270486) 3270486..3271631 - 1146 WP_001300387.1 glycerate 2-kinase -
LAJ62_RS15955 (3271728) 3271728..3272618 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
LAJ62_RS15960 (3272648) 3272648..3273418 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
LAJ62_RS15965 (3273434) 3273434..3274768 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
LAJ62_RS15970 (3275143) 3275143..3276714 + 1572 WP_001273753.1 galactarate dehydratase -
LAJ62_RS15975 (3276863) 3276863..3277198 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
LAJ62_RS15980 (3277198) 3277198..3277662 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
LAJ62_RS15985 (3277717) 3277717..3278526 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
LAJ62_RS15990 (3278775) 3278775..3280055 + 1281 WP_001698595.1 tagatose-bisphosphate aldolase subunit KbaZ -
LAJ62_RS15995 (3280078) 3280078..3280551 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
LAJ62_RS16000 (3280562) 3280562..3280933 + 372 Protein_3127 PTS sugar transporter subunit IIC -
LAJ62_RS16005 (3280929) 3280929..3281486 + 558 Protein_3128 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004