MGE detailed information
MGE type: Integron MGE length: 86815 bp
Accession: NZ_CP080463 Location: 146834..233648 Organism: Vibrio cholerae strain ICDC-VC702 Replicon: chromosome
Accession: NZ_CP080463 Location: 146834..233648 Organism: Vibrio cholerae strain ICDC-VC702 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K1T74_RS15080 | 142153..143283 | + | 1131 | WP_000139211.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| K1T74_RS15085 | 143576..145504 | + | 1929 | WP_220106409.1 | threonine--tRNA ligase | - |
| K1T74_RS15090 | 145508..146059 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| K1T74_RS15095 | 146163..146357 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| K1T74_RS15100 | 146399..146752 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| K1T74_RS15105 | 146834..147796 | - | 963 | WP_199355954.1 | IS91 family transposase ISAzo26 | Transposase |
| K1T74_RS15110 | 148042..148641 | + | 600 | WP_114726127.1 | pentapeptide repeat-containing protein | - |
| K1T74_RS19750 | 149000..149062 | + | 63 | Protein_124 | DUF645 family protein | - |
| K1T74_RS19755 | 149052..149141 | + | 90 | WP_229022500.1 | Tfp pilus assembly protein | - |
| K1T74_RS15120 | 149342..149878 | + | 537 | WP_220106410.1 | GNAT family protein | - |
| K1T74_RS15125 | 150405..150905 | + | 501 | WP_148530004.1 | NAD(P)H-dependent oxidoreductase | - |
| K1T74_RS15130 | 151161..151586 | + | 426 | WP_108347903.1 | hypothetical protein | - |
| K1T74_RS15135 | 151934..152053 | + | 120 | Protein_129 | DUF645 family protein | - |
| K1T74_RS19760 | 152043..152141 | + | 99 | WP_230078617.1 | Tfp pilus assembly protein | - |
| K1T74_RS15140 | 152318..152905 | + | 588 | WP_185842728.1 | hypothetical protein | - |
| K1T74_RS15145 | 153065..153874 | + | 810 | WP_199357937.1 | GIY-YIG nuclease family protein | - |
| K1T74_RS15150 | 154056..154322 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| K1T74_RS15155 | 154309..154554 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| K1T74_RS19765 | 154650..154793 | + | 144 | WP_258534307.1 | acetyltransferase | - |
| K1T74_RS19770 | 154926..154981 | + | 56 | Protein_136 | DUF645 family protein | - |
| K1T74_RS19775 | 154960..155055 | + | 96 | WP_230965109.1 | Tfp pilus assembly protein | - |
| K1T74_RS15165 | 155231..155767 | + | 537 | WP_149595946.1 | nucleotidyltransferase family protein | - |
| K1T74_RS15170 | 155911..156540 | + | 630 | WP_001009012.1 | Chloramphenicol acetyltransferase | VF |
| K1T74_RS15175 | 156696..157232 | + | 537 | WP_000469484.1 | GNAT family protein | - |
| K1T74_RS15180 | 157416..157979 | + | 564 | WP_156844814.1 | hypothetical protein | - |
| K1T74_RS15185 | 157972..158487 | + | 516 | WP_114806728.1 | hypothetical protein | - |
| K1T74_RS15190 | 158584..158745 | + | 162 | WP_113625331.1 | DUF3709 domain-containing protein | - |
| K1T74_RS15195 | 158766..158987 | + | 222 | WP_114710075.1 | DUF3709 domain-containing protein | - |
| K1T74_RS15200 | 159276..159746 | + | 471 | WP_088129370.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15205 | 159881..160417 | + | 537 | WP_154027172.1 | nucleotidyltransferase family protein | - |
| K1T74_RS15210 | 160745..161200 | + | 456 | WP_220106411.1 | hypothetical protein | - |
| K1T74_RS15215 | 161337..161708 | + | 372 | WP_057563809.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| K1T74_RS15220 | 161851..162384 | + | 534 | WP_000679873.1 | GNAT family protein | - |
| K1T74_RS15225 | 162474..163174 | + | 701 | Protein_150 | HAD family phosphatase | - |
| K1T74_RS19780 | 163881..164024 | + | 144 | WP_002021997.1 | hypothetical protein | - |
| K1T74_RS15230 | 164088..164267 | + | 180 | WP_088129405.1 | DUF645 family protein | - |
| K1T74_RS19785 | 164382..164453 | + | 72 | Protein_153 | damage-inducible protein DinB | - |
| K1T74_RS15235 | 164470..165099 | + | 630 | WP_113593852.1 | hypothetical protein | - |
| K1T74_RS15240 | 165267..165890 | + | 624 | WP_017046202.1 | DUF1349 domain-containing protein | - |
| K1T74_RS19790 | 165897..166013 | + | 117 | WP_129533214.1 | DUF3265 domain-containing protein | - |
| K1T74_RS15245 | 166055..166513 | + | 459 | WP_032473158.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15250 | 166669..167163 | + | 495 | WP_000573467.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15255 | 167412..167657 | + | 246 | WP_258534314.1 | DUF3709 domain-containing protein | - |
| K1T74_RS15260 | 167939..168517 | + | 579 | WP_220106413.1 | DJ-1/PfpI family protein | - |
| K1T74_RS19795 | 168868..168930 | + | 63 | Protein_161 | DUF645 family protein | - |
| K1T74_RS19800 | 168920..169030 | + | 111 | WP_223804330.1 | Tfp pilus assembly protein | - |
| K1T74_RS15270 | 169189..169614 | + | 426 | WP_220106414.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS19805 | 169671..169847 | + | 177 | WP_258534308.1 | acetyltransferase | - |
| K1T74_RS15275 | 169911..170090 | + | 180 | WP_088129405.1 | DUF645 family protein | - |
| K1T74_RS19810 | 170205..170300 | + | 96 | WP_258534309.1 | acetyltransferase | - |
| K1T74_RS19815 | 170285..170572 | + | 288 | WP_258534310.1 | hypothetical protein | - |
| K1T74_RS15285 | 171037..171384 | + | 348 | WP_220106415.1 | hypothetical protein | - |
| K1T74_RS15290 | 171524..172555 | + | 1032 | WP_142729493.1 | DUF4238 domain-containing protein | - |
| K1T74_RS19820 | 172546..172662 | + | 117 | WP_142729494.1 | DUF3265 domain-containing protein | - |
| K1T74_RS15295 | 172709..173410 | + | 702 | WP_220106416.1 | hypothetical protein | - |
| K1T74_RS19825 | 173772..173834 | + | 63 | Protein_172 | DUF645 family protein | - |
| K1T74_RS19830 | 173824..173934 | + | 111 | WP_223804330.1 | Tfp pilus assembly protein | - |
| K1T74_RS15305 | 174106..174786 | + | 681 | WP_220106417.1 | hypothetical protein | - |
| K1T74_RS19835 | 174847..174918 | + | 72 | Protein_175 | acetyltransferase | - |
| K1T74_RS15310 | 174934..175431 | + | 498 | WP_000259918.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS19840 | 175488..175550 | + | 63 | Protein_177 | acetyltransferase | - |
| K1T74_RS15315 | 175571..176197 | + | 627 | WP_001889198.1 | hypothetical protein | - |
| K1T74_RS15320 | 176360..176821 | + | 462 | WP_142729373.1 | hypothetical protein | - |
| K1T74_RS15325 | 177143..177295 | + | 153 | WP_142542324.1 | DUF645 family protein | - |
| K1T74_RS15330 | 177561..177698 | + | 138 | WP_000757220.1 | YHYH domain-containing protein | - |
| K1T74_RS15335 | 177951..178568 | + | 618 | WP_142736388.1 | plasmid pRiA4b ORF-3 family protein | - |
| K1T74_RS15340 | 178711..179181 | + | 471 | WP_258534311.1 | dual specificity protein phosphatase family protein | - |
| K1T74_RS15345 | 179272..180174 | + | 903 | WP_001203707.1 | hypothetical protein | - |
| K1T74_RS19845 | 180250..180318 | + | 69 | Protein_185 | acetyltransferase | - |
| K1T74_RS15350 | 180331..180984 | + | 654 | WP_113612641.1 | hypothetical protein | - |
| K1T74_RS15355 | 181087..181488 | + | 402 | WP_012706060.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K1T74_RS15360 | 181485..182018 | + | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K1T74_RS19850 | 182028..182138 | + | 111 | WP_086010065.1 | DUF3265 domain-containing protein | - |
| K1T74_RS15365 | 182165..182776 | + | 612 | WP_113622232.1 | hypothetical protein | - |
| K1T74_RS15370 | 182930..183484 | + | 555 | WP_220106419.1 | Maltose O-acetyltransferase | VF |
| K1T74_RS19855 | 183857..183919 | + | 63 | Protein_192 | DUF645 family protein | - |
| K1T74_RS19860 | 183909..184019 | + | 111 | WP_223804330.1 | Tfp pilus assembly protein | - |
| K1T74_RS15380 | 184178..184603 | + | 426 | WP_220106420.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15385 | 185083..185454 | + | 372 | WP_220106505.1 | DUF4144 domain-containing protein | - |
| K1T74_RS15390 | 185635..185871 | - | 237 | WP_000772130.1 | RNA-binding protein | - |
| K1T74_RS15395 | 186126..187196 | + | 1071 | WP_220106421.1 | hypothetical protein | - |
| K1T74_RS15400 | 187219..187311 | + | 93 | WP_220106422.1 | DUF3265 domain-containing protein | - |
| K1T74_RS15405 | 187341..187619 | - | 279 | WP_000578473.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| K1T74_RS15410 | 187616..187900 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K1T74_RS15415 | 188016..188666 | + | 651 | WP_220106423.1 | DUF4875 domain-containing protein | - |
| K1T74_RS15420 | 188821..189132 | + | 312 | WP_000623749.1 | hypothetical protein | - |
| K1T74_RS19865 | 189228..189902 | + | 675 | WP_258534315.1 | SLATT domain-containing protein | - |
| K1T74_RS15430 | 190060..190584 | + | 525 | WP_220106424.1 | GNAT family protein | - |
| K1T74_RS15435 | 190758..190994 | - | 237 | WP_000772130.1 | RNA-binding protein | - |
| K1T74_RS15440 | 191246..191671 | + | 426 | WP_220106425.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15445 | 191858..192166 | + | 309 | WP_220106426.1 | hypothetical protein | - |
| K1T74_RS15450 | 192316..192804 | + | 489 | WP_002051091.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS19870 | 192861..192932 | + | 72 | Protein_209 | acetyltransferase | - |
| K1T74_RS15455 | 193098..193279 | + | 182 | Protein_210 | DUF645 family protein | - |
| K1T74_RS15460 | 193540..193821 | + | 282 | WP_176398545.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K1T74_RS15465 | 193818..194105 | + | 288 | WP_199352274.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K1T74_RS15470 | 194267..194653 | + | 387 | WP_000703159.1 | VOC family protein | - |
| K1T74_RS15475 | 194798..195295 | + | 498 | WP_220106427.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15480 | 195459..196229 | + | 771 | WP_057569086.1 | alpha/beta hydrolase | - |
| K1T74_RS15485 | 196397..197320 | + | 924 | WP_258534312.1 | DUF4263 domain-containing protein | - |
| K1T74_RS19875 | 197424..197519 | + | 96 | WP_114762990.1 | hypothetical protein | - |
| K1T74_RS15495 | 197571..197981 | + | 411 | WP_220106428.1 | hypothetical protein | - |
| K1T74_RS15500 | 198135..198413 | - | 279 | WP_148553813.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K1T74_RS15505 | 198410..198694 | - | 285 | WP_002044806.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K1T74_RS19880 | 198844..198923 | + | 80 | Protein_221 | acetyltransferase | - |
| K1T74_RS19885 | 199047..199199 | + | 153 | Protein_222 | DUF645 family protein | - |
| K1T74_RS15515 | 199475..200392 | + | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| K1T74_RS15520 | 200590..200847 | + | 258 | WP_220106429.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| K1T74_RS15525 | 200835..201136 | + | 302 | Protein_225 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| K1T74_RS15530 | 201386..201811 | + | 426 | WP_001898239.1 | hypothetical protein | - |
| K1T74_RS15535 | 201973..202635 | + | 663 | WP_202863405.1 | hypothetical protein | - |
| K1T74_RS15540 | 202847..203671 | + | 825 | WP_220106430.1 | serine protease | - |
| K1T74_RS15545 | 203830..204288 | + | 459 | WP_114755989.1 | hypothetical protein | - |
| K1T74_RS15550 | 204328..204405 | + | 78 | Protein_230 | VOC family protein | - |
| K1T74_RS15555 | 204522..204821 | - | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K1T74_RS15560 | 204818..205060 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| K1T74_RS15565 | 205190..205288 | + | 99 | WP_189018378.1 | acetyltransferase | Antitoxin Detail |
| K1T74_RS15570 | 205309..205575 | + | 267 | WP_220106431.1 | BrnT family toxin | Toxin Detail |
| K1T74_RS15575 | 205562..205804 | + | 243 | WP_033933251.1 | hypothetical protein | Antitoxin Detail |
| K1T74_RS15580 | 205948..206715 | + | 768 | WP_220106432.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15585 | 206846..207232 | + | 387 | WP_001015868.1 | NUDIX hydrolase | - |
| K1T74_RS15590 | 207371..207823 | + | 453 | WP_000383626.1 | hypothetical protein | - |
| K1T74_RS19890 | 207892..207960 | + | 69 | Protein_239 | acetyltransferase | - |
| K1T74_RS15595 | 207973..208797 | + | 825 | WP_220106433.1 | hypothetical protein | - |
| K1T74_RS15600 | 208941..209486 | + | 546 | WP_000494513.1 | GNAT family protein | - |
| K1T74_RS15610 | 209626..209922 | + | 297 | WP_000617997.1 | Dabb family protein | - |
| K1T74_RS19895 | 209997..210062 | + | 66 | Protein_243 | acetyltransferase | - |
| K1T74_RS15615 | 210094..210633 | + | 540 | WP_001898634.1 | histidine phosphatase family protein | - |
| K1T74_RS15620 | 210774..211322 | + | 549 | WP_220106434.1 | hypothetical protein | - |
| K1T74_RS15625 | 211607..212032 | + | 426 | WP_001913434.1 | hypothetical protein | - |
| K1T74_RS15630 | 212230..212727 | + | 498 | WP_000259905.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS19900 | 212783..212851 | + | 69 | Protein_248 | acetyltransferase | - |
| K1T74_RS15635 | 213022..213201 | + | 180 | WP_025998961.1 | DUF645 family protein | - |
| K1T74_RS15640 | 213452..213709 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K1T74_RS15645 | 213697..213999 | + | 303 | WP_131476981.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K1T74_RS15650 | 214340..214492 | + | 153 | WP_001893908.1 | DUF645 family protein | - |
| K1T74_RS15655 | 214700..215047 | + | 348 | WP_142542447.1 | hypothetical protein | - |
| K1T74_RS15660 | 215166..215471 | + | 306 | WP_258534313.1 | hypothetical protein | - |
| K1T74_RS15665 | 215589..216249 | + | 661 | Protein_255 | Streptogramin A acetyltransferase | VF |
| K1T74_RS19905 | 216386..216784 | + | 399 | Protein_256 | GNAT family N-acetyltransferase | - |
| K1T74_RS19910 | 216908..217078 | + | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| K1T74_RS15675 | 217078..217479 | + | 402 | WP_220106435.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| K1T74_RS19915 | 217482..217592 | + | 111 | WP_082798255.1 | DUF3265 domain-containing protein | - |
| K1T74_RS15680 | 217620..218087 | + | 468 | WP_025992851.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15685 | 218288..218539 | + | 252 | WP_088124792.1 | TIGR03643 family protein | - |
| K1T74_RS15690 | 218703..219551 | + | 849 | WP_108347920.1 | hypothetical protein | - |
| K1T74_RS15695 | 219714..220352 | + | 639 | WP_220106507.1 | HD domain-containing protein | - |
| K1T74_RS15700 | 220518..221258 | + | 741 | WP_172781623.1 | PhzF family phenazine biosynthesis protein | - |
| K1T74_RS15705 | 221412..221951 | + | 540 | WP_001898634.1 | histidine phosphatase family protein | - |
| K1T74_RS15710 | 222086..222622 | + | 537 | WP_000644499.1 | nucleotidyltransferase family protein | - |
| K1T74_RS15715 | 222760..223359 | + | 600 | WP_220106436.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| K1T74_RS15720 | 223544..223957 | + | 414 | WP_000049417.1 | VOC family protein | - |
| K1T74_RS15725 | 224170..224421 | + | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K1T74_RS15730 | 224411..224698 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K1T74_RS15735 | 224908..225150 | + | 243 | WP_000107462.1 | hypothetical protein | - |
| K1T74_RS15740 | 225325..225714 | + | 390 | WP_001081302.1 | hypothetical protein | - |
| K1T74_RS15745 | 225850..226275 | + | 426 | WP_002045007.1 | GNAT family N-acetyltransferase | - |
| K1T74_RS15750 | 226450..227322 | + | 873 | Protein_274 | DUF3800 domain-containing protein | - |
| K1T74_RS15755 | 227472..228071 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| K1T74_RS15760 | 228227..228763 | + | 537 | WP_000469484.1 | GNAT family protein | - |
| K1T74_RS19920 | 228820..228891 | + | 72 | Protein_277 | iron transporter | - |
| K1T74_RS15765 | 229303..229572 | + | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| K1T74_RS15770 | 229566..230087 | + | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| K1T74_RS15775 | 230386..230511 | + | 126 | WP_001905700.1 | DUF645 family protein | - |
| K1T74_RS15780 | 230762..231157 | + | 396 | WP_001000868.1 | hypothetical protein | - |
| K1T74_RS15785 | 231296..231574 | - | 279 | WP_001897114.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| K1T74_RS15790 | 231571..231855 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K1T74_RS15795 | 232049..232564 | + | 516 | WP_000343779.1 | dTDP-fucosamine acetyltransferase | VF |
| K1T74_RS15800 | 232748..233161 | + | 414 | WP_000049420.1 | VOC family protein | - |
| K1T74_RS15805 | 233716..234894 | + | 1179 | Protein_286 | IS3-like element ISVch4 family transposase | - |
| K1T74_RS15810 | 235299..238085 | + | 2787 | WP_220106437.1 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|