NZ_CP0799914228731..4238678

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP079991        Location: 4228731..4238678         Organism: Escherichia coli strain KMS2005       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KYK86_RS20460 (4224563) 4224563..4225894 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
KYK86_RS20465 (4225916) 4225916..4226905 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
KYK86_RS20470 (4227004) 4227004..4227942 - 939 WP_000104211.1 transcriptional regulator TdcA -
KYK86_RS20475 (4228257) 4228257..4228475 + 219 WP_001301311.1 transcriptional activator TdcR -
KYK86_RS20480 (4228731) 4228731..4229270 + 540 WP_000675733.1 protein YhaB -
KYK86_RS20485 (4229292) 4229292..4230479 + 1188 WP_000484600.1 YhaC family protein -
KYK86_RS20495 (4231502) 4231502..4232647 - 1146 WP_001300387.1 glycerate 2-kinase -
KYK86_RS20500 (4232744) 4232744..4233634 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
KYK86_RS20505 (4233664) 4233664..4234434 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
KYK86_RS20510 (4234450) 4234450..4235784 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
KYK86_RS20515 (4236159) 4236159..4237730 + 1572 WP_001273753.1 galactarate dehydratase -
KYK86_RS20520 (4237879) 4237879..4238214 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
KYK86_RS20525 (4238214) 4238214..4238678 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
KYK86_RS20530 (4238733) 4238733..4239542 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
KYK86_RS20535 (4239791) 4239791..4241071 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
KYK86_RS20540 (4241094) 4241094..4241567 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
KYK86_RS20545 (4241578) 4241578..4241949 + 372 Protein_4035 PTS sugar transporter subunit IIC -
KYK86_RS20550 (4241945) 4241945..4242502 + 558 Protein_4036 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004