MGE detailed information
MGE type: Genomic_island MGE length: 9948 bp
Accession: NZ_CP076318 Location: 2618736..2628683 Organism: Escherichia coli strain Survcare045 Replicon: chromosome
Accession: NZ_CP076318 Location: 2618736..2628683 Organism: Escherichia coli strain Survcare045 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KNN08_RS14190 (2614568) | 2614568..2615899 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| KNN08_RS14195 (2615921) | 2615921..2616910 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| KNN08_RS14200 (2617009) | 2617009..2617947 | - | 939 | WP_000104207.1 | transcriptional regulator TdcA | - |
| KNN08_RS14205 (2618262) | 2618262..2618480 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| KNN08_RS14210 (2618736) | 2618736..2619275 | + | 540 | WP_208933202.1 | protein YhaB | - |
| KNN08_RS14215 (2619297) | 2619297..2620484 | + | 1188 | WP_000484594.1 | YhaC family protein | - |
| KNN08_RS14225 (2621507) | 2621507..2622652 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| KNN08_RS14230 (2622749) | 2622749..2623639 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| KNN08_RS14235 (2623669) | 2623669..2624439 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| KNN08_RS14240 (2624455) | 2624455..2625789 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| KNN08_RS14245 (2626164) | 2626164..2627735 | + | 1572 | WP_001273752.1 | galactarate dehydratase | - |
| KNN08_RS14250 (2627884) | 2627884..2628219 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| KNN08_RS14255 (2628219) | 2628219..2628683 | + | 465 | WP_000347275.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| KNN08_RS14260 (2628738) | 2628738..2629547 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| KNN08_RS14265 (2629796) | 2629796..2631076 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| KNN08_RS14270 (2631099) | 2631099..2631572 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| KNN08_RS14275 (2631583) | 2631583..2632362 | + | 780 | WP_000406209.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| KNN08_RS14280 (2632352) | 2632352..2633230 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| KNN08_RS14285 (2633248) | 2633248..2633682 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.005 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.001 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.001 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.005 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.005 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.005 |