MGE detailed information
MGE type: Genomic_island MGE length: 11570 bp
Accession: NZ_CP070103 Location: 826964..838533 Organism: Escherichia coli strain FDAARGOS_1277 Replicon: chromosome
Accession: NZ_CP070103 Location: 826964..838533 Organism: Escherichia coli strain FDAARGOS_1277 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K07_RS03915 (823289) | 823289..824497 | - | 1209 | WP_001295545.1 | propionate kinase | - |
| I6K07_RS03920 (824523) | 824523..825854 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| I6K07_RS03925 (825876) | 825876..826865 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| I6K07_RS03930 (826964) | 826964..827902 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| I6K07_RS22825 (828217) | 828217..828435 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| I6K07_RS03940 (828691) | 828691..829230 | + | 540 | WP_000675733.1 | protein YhaB | - |
| I6K07_RS03945 (829252) | 829252..830440 | + | 1189 | Protein_769 | YhaC family protein | - |
| I6K07_RS03955 (831357) | 831357..832502 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| I6K07_RS03960 (832599) | 832599..833489 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| I6K07_RS03965 (833519) | 833519..834289 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| I6K07_RS03970 (834305) | 834305..835639 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| I6K07_RS03975 (836014) | 836014..837585 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| I6K07_RS03980 (837734) | 837734..838069 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| I6K07_RS03985 (838069) | 838069..838533 | + | 465 | WP_085004732.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| I6K07_RS03990 (838588) | 838588..839397 | - | 810 | WP_085004733.1 | aga operon transcriptional regulator AgaR | - |
| I6K07_RS03995 (839646) | 839646..840926 | + | 1281 | WP_000681905.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| I6K07_RS04000 (840949) | 840949..841422 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| I6K07_RS04005 (841433) | 841433..842212 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| I6K07_RS04010 (842202) | 842202..843080 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| I6K07_RS04015 (843098) | 843098..843532 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.008 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.008 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.008 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.003 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.003 |