NZ_CP0693861892633..1902580

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP069386        Location: 1892633..1902580         Organism: Escherichia coli strain XH1815       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JSW75_RS09125 (1888465) 1888465..1889796 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
JSW75_RS09130 (1889818) 1889818..1890807 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
JSW75_RS09135 (1890906) 1890906..1891844 - 939 WP_000104211.1 transcriptional regulator TdcA -
JSW75_RS09140 (1892159) 1892159..1892377 + 219 WP_001301311.1 transcriptional activator TdcR -
JSW75_RS09145 (1892633) 1892633..1893172 + 540 WP_000675733.1 protein YhaB -
JSW75_RS09150 (1893194) 1893194..1894381 + 1188 WP_000484600.1 YhaC family protein -
JSW75_RS09160 (1895404) 1895404..1896549 - 1146 WP_001300387.1 glycerate 2-kinase -
JSW75_RS09165 (1896646) 1896646..1897536 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
JSW75_RS09170 (1897566) 1897566..1898336 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
JSW75_RS09175 (1898352) 1898352..1899686 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
JSW75_RS09180 (1900061) 1900061..1901632 + 1572 WP_001273753.1 galactarate dehydratase -
JSW75_RS09185 (1901781) 1901781..1902116 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
JSW75_RS09190 (1902116) 1902116..1902580 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
JSW75_RS09195 (1902635) 1902635..1903444 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
JSW75_RS09200 (1903693) 1903693..1904973 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
JSW75_RS09205 (1904996) 1904996..1905469 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
JSW75_RS09210 (1905480) 1905480..1905851 + 372 Protein_1803 PTS sugar transporter subunit IIC -
JSW75_RS09215 (1905847) 1905847..1906404 + 558 Protein_1804 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004