MGE detailed information
MGE type: Genomic_island MGE length: 11489 bp
Accession: NZ_CP049112 Location: 367766..379254 Organism: Escherichia coli strain WF5-5-T2 Replicon: chromosome
Accession: NZ_CP049112 Location: 367766..379254 Organism: Escherichia coli strain WF5-5-T2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6R06_RS01720 (363940) | 363940..365271 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| G6R06_RS01725 (365293) | 365293..366282 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| G6R06_RS01730 (366381) | 366381..366593 | - | 213 | Protein_341 | transcriptional regulator TdcA | - |
| G6R06_RS01735 (366740) | 366740..367720 | - | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| G6R06_RS01740 (367790) | 367790..368518 | - | 729 | Protein_343 | transcriptional regulator TdcA | - |
| G6R06_RS01745 (368833) | 368833..369051 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| G6R06_RS01750 (369307) | 369307..369846 | + | 540 | WP_000675733.1 | protein YhaB | - |
| G6R06_RS01755 (369868) | 369868..371055 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| G6R06_RS01765 (372078) | 372078..373223 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| G6R06_RS01770 (373320) | 373320..374210 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| G6R06_RS01775 (374240) | 374240..375010 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| G6R06_RS01780 (375026) | 375026..376360 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| G6R06_RS01785 (376735) | 376735..378306 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| G6R06_RS01790 (378455) | 378455..378790 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| G6R06_RS01795 (378790) | 378790..379254 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| G6R06_RS01800 (379309) | 379309..380118 | - | 810 | WP_103119122.1 | aga operon transcriptional regulator AgaR | - |
| G6R06_RS01805 (380367) | 380367..381647 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| G6R06_RS01810 (381670) | 381670..382143 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| G6R06_RS01815 (382154) | 382154..382525 | + | 372 | Protein_357 | PTS sugar transporter subunit IIC | - |
| G6R06_RS01820 (382521) | 382521..383078 | + | 558 | Protein_358 | amidohydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20042 | CP009789 | 3247092..3263092 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.001 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.001 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.004 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.004 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.004 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.001 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.001 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.001 |