NZ_CP0432272333385..2343332

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP043227        Location: 2333385..2343332         Organism: Escherichia coli strain Ec-050       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FX998_RS11390 () 2329217..2330548 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
FX998_RS11395 () 2330570..2331559 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
FX998_RS11400 () 2331658..2332596 - 939 WP_000104211.1 transcriptional regulator TdcA -
FX998_RS11405 () 2332785..2333129 + 345 WP_000145840.1 transcriptional activator TdcR -
FX998_RS11410 () 2333385..2333924 + 540 WP_000675733.1 hypothetical protein -
FX998_RS11415 () 2333946..2335133 + 1188 WP_000484594.1 YhaC family protein -
FX998_RS11425 () 2336156..2337301 - 1146 WP_001300387.1 glycerate 2-kinase -
FX998_RS11430 () 2337398..2338288 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
FX998_RS11435 () 2338318..2339088 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
FX998_RS11440 () 2339104..2340438 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
FX998_RS11445 () 2340813..2342384 + 1572 WP_001273752.1 galactarate dehydratase -
FX998_RS11450 () 2342533..2342868 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
FX998_RS11455 () 2342868..2343332 + 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
FX998_RS11460 () 2343387..2344196 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
FX998_RS11465 () 2344445..2345725 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
FX998_RS11470 () 2345748..2346221 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
FX998_RS11475 () 2346232..2347011 + 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
FX998_RS11480 () 2347001..2347879 + 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
FX998_RS11485 () 2347897..2348331 + 435 WP_000948824.1 PTS sugar transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.001
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.005
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.001
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.001
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.001
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.001
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.001
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.005
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.005