NZ_CP042901625883..637557

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP042901        Location: 625883..637557         Organism: Escherichia coli strain CFSAN061762       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CA898_RS02980 (620884) 620884..621318 - 435 WP_000948824.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -
CA898_RS02985 (621336) 621336..622214 - 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
CA898_RS02990 (622204) 622204..622983 - 780 WP_000406209.1 PTS N-acetylgalactosamine transporter subunit IIC -
CA898_RS02995 (622994) 622994..623467 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
CA898_RS03000 (623490) 623490..624770 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
CA898_RS03005 (625019) 625019..625828 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
CA898_RS03010 (625883) 625883..626347 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
CA898_RS03015 (626347) 626347..626682 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
CA898_RS03020 (626831) 626831..628402 - 1572 WP_001273753.1 galactarate dehydratase -
CA898_RS03025 (628777) 628777..630111 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
CA898_RS03030 (630127) 630127..630897 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
CA898_RS03035 (630927) 630927..631817 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
CA898_RS03040 (631914) 631914..633059 + 1146 WP_001300387.1 glycerate 2-kinase -
CA898_RS03050 (634082) 634082..635269 - 1188 WP_004018360.1 YhaC family protein -
CA898_RS03055 (635291) 635291..635830 - 540 WP_000675733.1 protein YhaB -
CA898_RS03060 (636086) 636086..636304 - 219 WP_001301311.1 transcriptional activator TdcR -
CA898_RS03065 (636619) 636619..637557 + 939 WP_000104211.1 transcriptional regulator TdcA -
CA898_RS03070 (637656) 637656..638645 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
CA898_RS03075 (638667) 638667..639998 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
CA898_RS03080 (640024) 640024..641232 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0